Commit Graph

39409 Commits

Author SHA1 Message Date
7cfc34e45d the source_suffix option is supposed to be a map 2024-07-15 14:08:19 -04:00
046f57625a Merge branch 'develop' into collected-small-changes 2024-07-15 13:10:35 -04:00
0b08ee898c Merge pull request #4218 from robeme/electrode
Bugfixes and improvements for ELECTRODE package
2024-07-15 13:10:09 -04:00
bb15fa53cb Merge pull request #4230 from jrgissing/chunk_related_fixes
docs + minor msd/chunk refactor
2024-07-15 13:08:02 -04:00
b0238b1bf2 Merge pull request #4232 from rbberger/remove_sprintf_from_core
core files: replace sprintf with snprintf
2024-07-15 12:17:55 -04:00
1fe1aa0683 lower default update interval to 10ms 2024-07-15 10:28:22 -04:00
1d6959efe6 only print fix reaxff/bonds output during setup the first time 2024-07-15 06:58:05 -04:00
acd7bd111d remove dead code 2024-07-15 06:51:58 -04:00
6fedb6a1b8 fix compilation issue with latest QUIP/libAtoms code 2024-07-15 06:48:21 -04:00
970f518939 avoid out of range access 2024-07-15 06:25:03 -04:00
fb9a36c2f4 do not update the chart window when LAMMPS is not in a minimization or run 2024-07-13 19:12:46 -04:00
58513320d3 core files: replace sprintf with snprintf 2024-07-13 15:33:56 -06:00
1912083935 add warning about overflowing image flags and how to prevent that 2024-07-12 23:43:14 -04:00
a0fb12c265 disentangle the fix deform and fix deform/pressure pages somewhere for easier reading 2024-07-12 23:42:42 -04:00
06511a6e77 couple more doc tweaks 2024-07-11 19:17:09 -04:00
0e6ff7d70a only call post_force() if it was selected as callback. 2024-07-11 15:02:38 -04:00
47af1775c2 update test since we have now one invocation also during setup 2024-07-11 15:02:03 -04:00
a55092dc26 rewrap docs 2024-07-11 13:39:44 -04:00
c1c1d32136 The post_force callback should also be called during "setup" 2024-07-11 13:32:56 -04:00
9e917412c9 fix typo and rewrap lines 2024-07-11 12:39:42 -04:00
e51e0c1fb7 re-order entries 2024-07-11 11:37:42 -04:00
b9e263b1d1 re-add empty row between special and regular pair styles 2024-07-10 16:17:33 -04:00
1a30fe5349 reset_atoms: one more grammar tweak 2024-07-06 18:03:43 -04:00
08cf19955d minor corrections to 'reset_atoms' docs 2024-07-06 17:57:18 -04:00
b1db2ddb3f store 'nchunk for msd' on first pass
because nchunk can be modified elsewhere
2024-07-06 15:57:18 -04:00
b7942ead3f chunk docs typo 2024-07-06 15:49:46 -04:00
54901eb8a4 remove pointless check 2024-07-06 09:55:41 -04:00
f34b6dacaf improve fix indent documentation 2024-07-06 09:55:22 -04:00
fdf9ffee73 use auto for type 2024-07-06 00:52:27 -04:00
9c8f7854ad avoid out-of-bounds string character access during completion 2024-07-06 00:50:15 -04:00
87060b2d3e display selected C++ standard as part of the CMake summary output 2024-07-05 21:37:04 -04:00
f05c87cd43 use proper const qualifier 2024-07-05 21:31:52 -04:00
96f2e32591 fix typo 2024-07-05 20:15:30 -04:00
61e391b449 correct check for invalid header keywords 2024-07-05 19:28:04 -04:00
b89bc47626 more thorough checks for molecule file header keywords 2024-07-05 19:10:48 -04:00
a3bacfca65 more unit tests for tokenizer functions constains() and matches() 2024-07-05 18:55:55 -04:00
6fd962e132 spelling 2024-07-05 16:44:08 -04:00
880aa40d1b add missing header 2024-07-05 16:23:02 -04:00
dacc55b889 Prevent overflow in neighbor output 2024-07-05 16:20:28 -04:00
f0a11dbefd also promote ndatum in MyPoolChunk class 2024-07-05 16:16:04 -04:00
caa1b4a891 promote ndatum to bigint to avoid overflows 2024-07-05 16:12:08 -04:00
8fcde04097 add a "matches()" method to the Tokenizer and ValueTokenizer classes using utils::strmatch() 2024-07-05 15:45:49 -04:00
eeaecb3ed3 macOS app bundle requires -D BUILD_TOOLS=yes 2024-07-04 15:13:06 -04:00
c0dfccdd64 add a few more flags to clang-tidy 2024-07-04 11:18:08 -04:00
da2bd44b73 modernize and reformat with clang-tidy and clang-format 2024-07-04 11:17:54 -04:00
cefe76919c make more use of auto and thus avoid having to specify the same type twice 2024-07-04 11:12:40 -04:00
10e3595b57 separately catch exceptions thrown by new 2024-07-03 22:20:06 -04:00
a4d69878fa update list of available sanitizers for Fedora 40 and GCC 14 2024-07-03 22:02:35 -04:00
f94b078936 use pkg-config instead of pkgconf consistently, since the latter comes with compatibility to the former 2024-07-03 21:21:35 -04:00
17d736c0f9 Merge branch 'develop' into electrode 2024-07-03 15:17:43 -04:00