Commit Graph

21170 Commits

Author SHA1 Message Date
8104f68bc1 Merge pull request #3963 from mkstoyanov/heffte_integration
Heffte integration
2023-12-12 17:27:02 -05:00
c33d950ac3 Merge pull request #3869 from jmgoff/compute-pace-update
Compute pace update
2023-12-12 16:19:41 -05:00
30051ec260 Merge pull request #3858 from jtclemm/new-computes
Adding tools to identify rattlers and measure nonaffine displacement
2023-12-06 02:51:21 -05:00
c092de9bc3 Merge pull request #3985 from yury-lysogorskiy/feature/zbl
ACE/ZBL core repulsion (+Kokkos implementation)
2023-12-06 01:22:06 -05:00
c90999a083 cosmetic 2023-12-05 21:56:29 -05:00
73f1bac827 remove commented out code. print warnings only on mpi rank 0 2023-12-05 06:09:34 -05:00
7d8de8301f Merge branch 'develop' into compute-pace-update 2023-12-05 06:05:34 -05:00
69fb814b33 Remove duplicated code, small whitespace tweaks 2023-12-04 17:31:38 -07:00
8389e2eb80 Merge pull request #4000 from akohlmey/collected-small-changes
Collected small changes
2023-12-02 12:15:36 -05:00
d77ba37128 Merge pull request #3962 from ndtrung81/amoeba-pppm-accuracy
AMOEBA/HIPPO RMS force accuracy estimate
2023-12-02 10:39:54 -05:00
318556497f refactor balance and fix balance to std::string to avoid buffer overflows 2023-12-02 09:32:53 -05:00
4035291a48 Merge branch 'develop' into collected-small-changes 2023-12-02 08:17:11 -05:00
95c2ad5150 Merge pull request #3998 from Bibobu/replicate_labelmap
Adding copy of label maps while using replicate command
2023-12-02 06:06:54 -05:00
a3d44e0048 make map types to merge explicit 2023-12-02 05:13:44 -05:00
1b282ad3fd Merge pull request #4001 from akohlmey/remove-reaxc
Remove "reax/c" alias for sources and examples and require to use "reaxff"
2023-12-02 02:32:12 -05:00
41a5fbc025 ensure must_check is initialized 2023-12-01 20:14:22 -05:00
3c331321b3 update the naming convention 2023-12-01 15:12:23 -05:00
a6e629f4e4 update variable names 2023-12-01 15:12:23 -05:00
5bbdfe5b4f enabled the use of heffte for the cpu backend 2023-12-01 15:12:23 -05:00
303f365435 Added reference to the related enum in the Atom class. 2023-12-01 17:12:15 +01:00
605dc08e73 whitespace 2023-11-30 11:35:44 -07:00
049fd06bdf handle thermo_modify energy yes correctly 2023-11-30 10:31:30 -05:00
6ff87f5c39 remove reax/c aliases and related code checking for them 2023-11-30 05:41:05 -05:00
f36f846e19 Merge branch 'develop' into mlquip 2023-11-28 09:23:53 -05:00
f83a3dd989 whitespace one more time 2023-11-28 09:23:31 -05:00
7631f2baa2 follow LAMMPS programming style more closely 2023-11-28 09:22:31 -05:00
34e373d114 removed tabs and unsused itype variable 2023-11-28 13:33:03 +00:00
8c34f7f7b8 switched 2D array out for scalar, and updated documentation 2023-11-28 11:37:59 +00:00
d57979eede Merge branch 'develop' of github.com:lammps/lammps into replicate_labelmap 2023-11-28 12:09:57 +01:00
dcb4127631 Added label map copy to replicate.cpp 2023-11-28 12:05:51 +01:00
2825aeff48 apply changes suggested by coverity scan 2023-11-28 05:26:45 -05:00
87c9891c07 Merge remote-tracking branch 'public-lammps/develop' into feature/zbl 2023-11-28 09:13:37 +01:00
92220140ab indicate if Intel package SIMD directives are enabled 2023-11-27 22:20:50 -05:00
664ffbedac fixed a missed scale of vdw via quip_energy 2023-11-28 03:16:37 +00:00
bbef545675 Merge pull request #3988 from akohlmey/collected-small-changes
Collected small changes and fixes
2023-11-27 21:41:03 -05:00
631dcc36de BUGFIX: TagPairPACEComputeNeigh - explicitly check if atom has neighbours (ncount>0), only them run parallel_reduce, otherwise set d_d_min and d_jj_min to default values 2023-11-27 23:51:51 +01:00
d76230c490 Merge pull request #3993 from alphataubio/patch-1
Update atom_map_kokkos.cpp to fix overflow warning
2023-11-27 15:09:39 -05:00
b03bee49b3 Small tweak to fix warning 2023-11-27 11:48:42 -07:00
7249aea5e5 error out when no per-type masses are set. warn if both per-type and per-atom masses are used. 2023-11-27 07:47:08 -05:00
7dbd649683 fix cut-n-paste bug 2023-11-27 05:31:30 -05:00
9e1f85518c avoid segfault with immediate variables 2023-11-27 05:31:12 -05:00
1d25862146 update documentation for the fact that exceptions in LAMMPS are always used 2023-11-26 13:11:18 -05:00
088c5d72a8 correct fix mvv/* compatibility checks in DPD-MESO package 2023-11-26 10:31:24 -05:00
7ac5f590ee Merge branch 'develop' into collected-small-changes 2023-11-25 22:36:39 -05:00
c0631c9bd2 add per-atom array corerep_factor to all four pair styles: pace, pace/extrapolation, pace/kk, pace/extrapolation/kk
upd PACELIB_URL to v.2023.11.25 (+md5sum) in ML-PACE.cmake and Install.py
2023-11-25 23:04:18 +01:00
e3ba19c145 Merge branch 'develop' into variable-custom-atom-properties 2023-11-25 06:42:38 -05:00
e15aef290d Update atom_map_kokkos.cpp to fix overflow warning
fix overflow compile warning while building KOKKOS package with -D LAMMPS_SIZES=bigbig:

/home/XXXX/lammps-2Aug2023/src/KOKKOS/atom_map_kokkos.cpp: In lambda function:
/home/XXXX/lammps-2Aug2023/src/KOKKOS/atom_map_kokkos.cpp:218:21: warning: overflow in conversion from ‘long int’ to ‘int’ changes value from ‘9223372036854775807’ to ‘-1’ [-Woverflow]
  218 |     int i_closest = MAXTAGINT;
      |                     ^~~~~~~~~
2023-11-25 03:06:10 -05:00
b4c09a3d65 Merge branch 'develop' into collected-small-changes 2023-11-25 02:57:03 -05:00
ea7f0deb42 some compilers require a code block to follow OpenMP pragmas, even if empty. 2023-11-24 14:46:49 -05:00
351fc63f27 use const reference instead of copy 2023-11-24 01:20:10 -05:00