Commit Graph

18517 Commits

Author SHA1 Message Date
877f4e7e29 Fix issue with KSpace slab correction energy with non-neutral systems 2022-10-11 09:43:18 -06:00
967c84cb69 Merge pull request #3470 from hammondkd/fortran-further-tinkering
Further extending the Fortran interface
2022-10-05 21:20:06 -04:00
7157643fdd Merge pull request #3315 from yury-lysogorskiy/feature/pace-al
ML_PACE with extrapolation grade / active learning
2022-10-05 20:16:13 -04:00
723255bf7e Merge remote-tracking branch 'github/develop' into fortran-further-tinkering 2022-10-05 10:52:36 -04:00
7fa020e574 Merge branch 'fortran-further-tinkering' of github.com:hammondkd/lammps into fortran-further-tinkering 2022-10-04 14:35:35 -05:00
8fd19fe7fe Fixed a typo in library.cpp (documentation) and adjusted spacing to be consistent 2022-10-04 14:35:24 -05:00
8be7634b5f Merge branch 'collected-small-changes' into pair-zero-full 2022-10-04 14:36:02 -04:00
017ea1ace9 Merge branch 'develop' into collected-small-changes 2022-10-04 14:34:24 -04:00
f2b3d8e8c3 use morse interaction energy from bond style morse not pair style morse 2022-10-04 07:02:44 -04:00
74d5893dd9 enable and apply clang-format 2022-10-04 05:06:31 -04:00
6a97ca2468 better error checking and reporting 2022-10-04 05:02:46 -04:00
a3c676015b store squared cutoff as documented 2022-10-04 04:13:42 -04:00
5508c7f25e Bug fix for pair_style list quartic. 2022-10-04 13:27:32 +08:00
bca8e6b85a store squared cutoff as documented 2022-10-04 00:14:06 -04:00
3374435281 add note that integer sizes can be queried without a LAMMPS handle 2022-10-03 23:19:05 -04:00
ed8e317ef6 Added quartic function for explicit pair interaction in pair_style list. 2022-10-04 10:40:32 +08:00
bb6a118006 refactor for simpler flow of control. apply clang-format. 2022-10-03 16:31:23 -04:00
21aded5e4e silence compiler warning 2022-10-03 15:14:54 -04:00
82bf23401f Fix whitespace 2022-10-03 12:45:18 -06:00
ba27ecf610 Add optional full flag to pair_zero 2022-10-03 11:53:41 -06:00
ccdcae0a99 fix_pair.h/cpp: remove modify_param(int, char **) 2022-10-03 19:47:02 +02:00
d711a51657 Merge remote-tracking branch 'github/develop' into fortran-further-tinkering 2022-10-03 09:37:52 -04:00
2970a2140f Merge pull request #3468 from akohlmey/collected-small-changes
Collected small changes
2022-10-03 09:37:29 -04:00
ea512ce2bb update comments about which files to keep synchronized for consistency 2022-10-03 09:22:28 -04:00
dc5324c1db Updated unit tests to use keepstuff; whitespace fixes 2022-10-02 21:26:42 -05:00
db9b59c269 Implemented scatter_atoms and scatter_atoms_subset + unit tests + documentation + typos/edits 2022-10-02 20:32:42 -05:00
c5c21bb36c Implemented, tested, and documented gather_atoms and variants; added RST docs for lammps_scatter_atoms and lammps_gather_atoms and variants (library.cpp); checked for missing atom map in lammps_gather_atoms_subset; fixed bug in keepstuff.f90; fixed docs for extract_variable 2022-10-02 15:28:10 -05:00
d7ff6337ed refactor fix ave/time to use array of struct 2022-10-02 14:48:53 -04:00
39ff5c5722 remove unused enums 2022-10-02 14:48:17 -04:00
1eedec11df Merge branch 'test-compute-chunk' into collected-small-changes 2022-10-01 15:05:59 -04:00
eeff6aa06c make sure to always look up the region to avoid null pointer dereference 2022-10-01 13:35:02 -04:00
b9cc150f44 add unit test for chunks 2022-10-01 10:39:23 -04:00
27d9e313f5 convert compute chunk/spread/atom 2022-09-30 21:42:04 -04:00
a323e09822 Merge branch 'lammps:develop' into fortran-further-tinkering 2022-09-30 19:40:32 -05:00
756d24ff9e Implemented vector-style variables in C, Python, and Fortran APIs; unit test and more for Fortran/extract_variable 2022-09-30 16:02:26 -05:00
cbe83701c1 better checking for valid data for format style variables 2022-09-30 15:06:25 -04:00
172106717d must match the entire string 2022-09-30 15:05:41 -04:00
a9701f54cb HIP tuning 2022-09-30 14:53:37 -04:00
ec0bc5aa5e improve detection of invalid format strings. allow to replace format style variables 2022-09-30 09:57:42 -04:00
038ad3a038 portability improvement 2022-09-30 09:02:14 -04:00
a7071fea78 Wrote docs for extract_fix,extract_variable; fixed python so it knows about string variables; doc typo fixes; part of extract_variable unit test 2022-09-29 19:28:15 -05:00
6962b43e70 Pack idxcg_block in with idxz 2022-09-29 09:56:20 -07:00
60f73b33bf Merge branch 'develop' into feature/snap-packed-idx 2022-09-29 09:50:33 -07:00
3ab8f6ea16 Finished docs for everything currently implemented 2022-09-29 09:14:49 -05:00
6c0da8cbaf Wrote documentation for extract_fix, extract_variable 2022-09-29 01:07:46 -05:00
1d4297e2dd Implemented extract_fix, extract_variable, flush_buffers; unit test for extract_fix 2022-09-28 22:09:26 -05:00
77fb3e8af8 improve error messages 2022-09-27 20:55:55 -04:00
90384371c0 this is redundant, since we set one_coeff and thus * * is required 2022-09-27 20:55:45 -04:00
5da63b1e1d Merge branch 'develop' into feature/pace-al 2022-09-27 14:01:58 -04:00
36d22b9d00 silence compiler warnings 2022-09-27 13:20:25 -04:00