Commit Graph

93 Commits

Author SHA1 Message Date
8df11e192d Add properties to Python LAMMPS wrapper to access info command data 2016-05-25 21:01:47 -04:00
03bde1b220 Added iPython example and tutorial 2016-05-24 12:35:37 -04:00
1ccc918d36 First version of more compact Python wrapper for LAMMPS 2016-05-24 12:35:10 -04:00
6193893f89 Reformat python interface 2016-05-24 11:54:09 -04:00
674da56554 make .gitignore python3 compatible 2016-05-20 14:54:36 -04:00
19b9fef0b1 Fix typo in lammps.py 2016-05-20 13:33:40 +02:00
2e01e2160e Merge branch 'merge-pull-55' into lammps-icms. add python3 compatibility
Include changes to the python wrapper and its install script
by Marting Bauer to add compatibility to python3.
2016-05-11 09:11:29 -04:00
fb13d99fa3 lammps.py: Python3 Compatibility
Python3 uses unicode strings by default which have to be
encoded before they are passed to the C-API via ctypes.

This commit encodes all string arguments by default, which works
for Python2 and Python3
2016-05-11 14:20:59 +02:00
1f7823d87a Python install.py: Python3 Compatibility
- install script used deprecated command module, that is replaced by
  shutil module in this commit
- changed print statements to functions
2016-05-11 14:20:58 +02:00
a70623ee43 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14592 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-02-15 15:30:15 +00:00
c81b3b2c1f update LAMMPS version automatically from source code 2016-02-11 13:58:58 +01:00
7183e000e7 load lammps shared object for directory in LD_LIBRARY_PATH, if not found in same directory than lammps.py 2016-02-11 13:22:46 +01:00
f5c2e4c895 change python module installer to try installing into user-site dir if global fails. 2016-02-11 12:06:03 +01:00
e7d896a459 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.txt
#	doc/improper_distance.txt
#	doc/pair_mdf.txt
#	python/lammps.py
#	src/MANYBODY/pair_polymorphic.cpp
#	src/MANYBODY/pair_polymorphic.h
2015-12-10 06:29:32 -05:00
87a47d8b99 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14330 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-09 21:33:03 +00:00
900a3aaf9d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14328 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-09 21:10:06 +00:00
6eed163c7b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14327 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-09 21:09:58 +00:00
e000e4a04f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14326 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-09 21:09:50 +00:00
cacf29bc56 update lammps python wrapper to support passing in a communicator from mpi4py 2015-12-07 20:59:20 -05:00
b10ae0abaf git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14270 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-11-21 00:35:23 +00:00
328f0070fe fix stupid typo 2015-11-11 18:33:25 -05:00
a7c5dfeefe correct memory leak and incorrect access to global vectors and arrays for fixes from python 2015-11-11 18:25:26 -05:00
ae980d6fd1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13986 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-09-02 20:41:38 +00:00
233a9edfa8 expose numetical version id to library and python interface 2015-09-01 10:31:43 -04:00
5e2ecf7ec3 handle lammps python module instances with names correctly. 2015-07-10 17:37:21 -04:00
0449d00dca Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
#	python/install.py
#	python/lammps.py
#	src/read_restart.cpp
#	src/write_restart.cpp
2015-07-03 07:37:10 -04:00
79e142b2ca git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13511 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-02 19:09:11 +00:00
d47d0de2b2 simpler way to determine the source file location 2015-06-29 23:12:20 -04:00
567d5a49cf find LAMMPS shared object location for ctypes loading from introspection 2015-06-29 15:02:37 -04:00
54233c58b1 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
2015-03-18 07:26:15 -04:00
fb2a894e03 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13236 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-03-17 16:02:06 +00:00
65f4f1e938 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms 2015-03-14 08:55:01 -04:00
6f706543fe git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13233 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-03-13 22:06:20 +00:00
1ed2f052c7 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms 2014-07-08 09:03:06 -04:00
3b9563910e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12173 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-07-07 19:19:55 +00:00
1ee7cb100d Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	src/atom_vec_hybrid.cpp
	src/verlet.cpp
2014-06-07 19:29:51 -04:00
87d0ff963b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12098 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-06-06 23:44:49 +00:00
d5a5342355 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12097 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-06-06 23:41:42 +00:00
46e8e6c120 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/MAKE/Makefile.openmpi
	src/MANYBODY/fix_qeq_comb.cpp
	src/MANYBODY/pair_nb3b_harmonic.cpp
	src/RIGID/fix_rigid_small.cpp
	src/RIGID/fix_shake.cpp
	src/USER-REAXC/fix_qeq_reax.cpp
	src/USER-REAXC/fix_reaxc_bonds.cpp
	src/read_data.cpp
	src/special.h
2014-01-18 11:52:59 -05:00
f4a776d4c3 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11247 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-17 16:11:02 +00:00
44917aeac7 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10064 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-06-10 15:01:35 +00:00
d91cbdf923 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10063 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-06-10 15:01:13 +00:00
1f5dcb1ecf use more portable shebang line in python scripts 2013-06-09 19:57:02 +02:00
8a912603a5 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
2013-03-12 18:44:52 +01:00
3ba07ca1e6 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9641 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-03-11 21:37:15 +00:00
e5cc471307 Merge branch 'master' into lammps-icms 2012-11-26 08:47:57 -05:00
ed53c9d2d5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9036 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-11-07 15:59:05 +00:00
5a75a6c827 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/REPLICA/verlet_split.cpp
	src/USER-OMP/fix_omp.cpp
2012-10-26 09:50:01 -04:00
8663c92293 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9012 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-10-25 16:36:45 +00:00
13dd457ae7 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9001 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-10-25 15:23:26 +00:00