Commit Graph

42614 Commits

Author SHA1 Message Date
95797d643b addition of extract & reinit methods in improper.h 2025-02-06 15:31:04 +02:00
c10219da9e Merge pull request #4451 from akohlmey/next_release
Step version strings for next feature release
patch_4Feb2025
2025-02-04 13:31:31 -05:00
2777984355 Merge pull request #4461 from akohlmey/last-minute-fixes
Last minute fixes for next feature release
2025-02-04 09:51:39 -05:00
3fb8857be5 relax epsilon for tests on ARM64 2025-02-03 22:19:12 -05:00
113b2e47f0 must set val.iarg before processing any arguments 2025-02-03 22:18:45 -05:00
a01ac8c907 use byref() instead of pointer() to pass pointers to ctypes objects to C 2025-02-03 22:18:17 -05:00
995d6ab41f Merge branch 'develop' into next_release 2025-02-03 17:55:37 -05:00
87dae19019 Merge pull request #4459 from akohlmey/collected-small-fixes
Collected small fixes and changes
2025-02-03 17:43:41 -05:00
848a4300fe Merge branch 'develop' into collected-small-fixes 2025-02-03 14:54:38 -05:00
3b62892fc3 Merge pull request #4450 from rbberger/rberger/python_numpy_wrapper_fixes
python: numpy wrapper handle error cases
2025-02-03 14:53:52 -05:00
06506aa23b Merge pull request #4415 from evoyiatzis/patch-2
Allow definition of prism region using equal style variables
2025-02-03 14:50:00 -05:00
8a0027e788 improve phrase 2025-02-03 11:40:56 -05:00
b17699a56a Merge pull request #4460 from ndtrung81/fixed-failed-regression-tests
Fixed the failed regression test with Lost atoms in an EFF example input, and added reference log files
2025-02-03 11:38:53 -05:00
a0253fba2d update instructions for building static executable, add flatpak build info 2025-02-02 11:10:33 -05:00
e567e4cdd6 update notes on release processing steps 2025-02-02 04:41:32 -05:00
6dfc4f343c update copyright date 2025-02-02 04:41:02 -05:00
22eb984e68 expand deprecation warnings 2025-02-01 22:37:52 -05:00
d1e65d0b9a remove extra comma 2025-02-01 22:33:32 -05:00
54832b2091 plug file descriptor leak 2025-02-01 21:33:33 -05:00
38b1efa9d4 fix small memory leak 2025-02-01 20:16:34 -05:00
7f9423a1ee fix small memory leak 2025-02-01 17:48:45 -05:00
e9f07af140 added the reference log files for example inputs under PACKAGES/eff 2025-02-01 14:55:38 -06:00
d17186a8fa remove multi/old from docs and print deprecation warning when used
also convert error messages to use new error location indicator API
2025-02-01 15:29:27 -05:00
e9e4addacb remove remaining references to removed minimizer style fire/old 2025-02-01 11:46:35 -05:00
f89ba1f354 update ReaxFF reference log files for current version of LAMMPS and use consistent names 2025-02-01 11:22:59 -05:00
3f5630c073 clarify and explain that there may not be neighbor list statistics data 2025-02-01 09:19:33 -05:00
64ec02b87d convert fix ave/correlate/long and fix ave/grid to new error APIs 2025-02-01 09:03:56 -05:00
920337963b reduce compiler warnings from unused variables, modernize a few loops. 2025-02-01 04:48:00 -05:00
8f23701352 must build plugins on Windows, too. 2025-02-01 02:07:01 -05:00
ebf81c0363 add tests for dreiding h-bond potentials 2025-02-01 02:01:48 -05:00
62d703a1f4 fixed lost atoms error with smaller time step for energy conservation and added reference log files for PACKAGES/eff/Auger-Adamantane 2025-01-31 23:13:31 -06:00
8b8e10d54f update regex for Windows 2025-01-31 23:30:33 -05:00
8e90e77a64 remove accidentally renamed file 2025-01-31 23:21:54 -05:00
541f81ba93 use full path when loading plugins 2025-01-31 23:19:56 -05:00
3a58f9a5aa delegate handling of multi-config path to CMake (if version 3.20 or later) 2025-01-31 22:50:13 -05:00
52fcfcaab1 fix typo 2025-01-31 22:04:57 -05:00
d96136f23d cstdbool header is deprecated and no longer needed with recent compilers 2025-01-31 22:01:06 -05:00
21f77a9275 update docs for Error::ARGZERO constant 2025-01-31 21:53:29 -05:00
fdc3823969 fix typo 2025-01-31 21:50:22 -05:00
eb1174b54b try to work around the ambiguity of 0 and null pointers 2025-01-31 21:48:29 -05:00
29b5fce5e4 do not define __INTEL_COMPILER to __INTEL_LLVM_COMPILER instead test for either
This shortcut will create problems for features that do not exist for
the Intel LLVM based compiler.
2025-01-31 21:20:44 -05:00
381f141384 correct some overeager changes 2025-01-31 21:19:13 -05:00
6da7e4aa47 update molecule file tester for changed error messages 2025-01-31 21:06:11 -05:00
be1be668a2 modernize error messages for processing molecule files 2025-01-31 20:33:47 -05:00
1dc5f8739a bugfix from @jtclem for molecule files with multiple molecule IDs 2025-01-31 20:32:58 -05:00
7d7cdf3e08 get past spell checker 2025-01-31 17:50:06 -05:00
a83b45c0fb use simpler std::string concatenation instead of implicit fmt::format() processing 2025-01-31 17:49:59 -05:00
9eb3e35255 add error URLs for molecule files 2025-01-31 17:49:49 -05:00
6f6adc05ce reassign error URL numbers to match list in pull request 2025-01-31 17:49:24 -05:00
c5f287d747 Merge pull request #4453 from akohlmey/partial-error-explanations
Partial error explanation changes
2025-01-31 14:37:19 -05:00