Commit Graph

172 Commits

Author SHA1 Message Date
7c3b8e014c rename some USER/misc dirs 2017-05-11 10:15:28 -06:00
d7f54464c6 Merge pull request #474 from rbberger/dump_vtk_fixes
Various dump vtk fixes
2017-05-11 09:25:42 -06:00
deff6ffaac Merge pull request #466 from DallasTrinkle/meam-spline-multicomponent
Meam spline multicomponent
2017-05-11 09:22:25 -06:00
4ecf876a64 Added two examples of using the VTK dump style 2017-05-10 19:52:00 -04:00
d0da0639f0 add a couple of simple example single/multi-elment inputs for meam/spline pair styles 2017-05-09 15:51:59 -04:00
addd87c0f7 new Section package and start doc pages and build scripts 2017-05-04 11:22:20 -06:00
949d61e01e rename examples folder for USER-CGSDK package 2017-04-26 19:26:27 -04:00
604afebf6f Update to oxDNA2 2017-03-28 18:22:02 +01:00
8afed61db1 Upgrade to oxDNA2 2017-03-28 18:16:36 +01:00
568b67eee9 include citation for reference paper into pair style momb 2017-03-23 12:00:53 -04:00
865b41e201 make pair style momb example follow LAMMPS conventions more closely 2017-03-23 11:50:10 -04:00
02e65900e6 add example log file generated from 17Nov16 version of lammps, make minimize and run short in system.in 2017-03-23 11:03:00 -04:00
1075be7eca rename zhou to momb in examples 2017-03-23 10:18:15 -04:00
43f27250b5 Merge branch 'add-pair-zhou' of https://github.com/tonnamb/lammps into pull-417 2017-03-22 14:05:16 -04:00
7435084375 Verified oxDNA with modified nucleotide layout 2017-03-22 15:59:10 +00:00
5c39dfd740 re-ran example with fixed exchanges 2017-03-20 09:22:09 -04:00
d04ea8653d add examples for pair_zhou 2017-03-18 21:21:25 -04:00
bed288339e simplify and shorten examples for fix filter/corotate and combine into a single folder 2017-03-16 15:02:50 -04:00
0d8f74f0c5 Merge branch 'filter_corotate' of https://github.com/lukin17/lammps into pull-416 2017-03-15 18:54:41 -04:00
c3ce3747e0 Added fix filter/corotate. 2017-03-15 11:34:01 +01:00
7a75cd111c Minor updates in documentation and setup tool, merge before upgrade to oxDNA2 2017-03-14 11:39:09 +00:00
23b8287933 Updated documentation and simple setup tool 2017-03-14 11:36:44 +00:00
920641bbff Merge pull request #399 from rbberger/docs_spelling_fixes
Correct spelling errors in documentation
2017-03-07 09:47:22 -07:00
4af6557568 Merge pull request #394 from jaapkroe/kolmogorov-crespi
Added Kolmogorov-Crespi potential
2017-03-07 09:46:08 -07:00
0798885bdb Merge pull request #389 from akohlmey/update-agni-potential
update AGNI potential for Al, reference runs and output and citation
2017-03-07 09:35:31 -07:00
efaa4c6710 new neigh_modify exclude option, other SNAP changes 2017-03-07 09:31:12 -07:00
d6800405a5 Fix more typos in examples 2017-03-07 00:57:23 -05:00
17486a9319 Convert USER/lb/polymer files to UNIX line endings and remove trailing whitespace 2017-03-05 21:16:21 -05:00
778a79b8ee Fix typos in examples folder 2017-03-05 21:10:33 -05:00
a1b40b902d Added Kolmogorov-Crespi potential 2017-02-28 14:59:13 +01:00
9999f363a1 remove outdated log files, too. 2017-02-24 15:34:59 -05:00
a18b4ef4b0 update AGNI potential for Al, reference runs and output and citation 2017-02-24 15:33:13 -05:00
3af4b3c28c Merge pull request #337 from ohenrich/user-cgdna
Added source code and documentation for USER-CGDNA
2017-01-18 11:31:35 -07:00
c52a26382f Merge pull request #339 from akohlmey/fixes-for-srp-example
Fixes for srp example
2017-01-17 09:36:28 -07:00
1b9e50c8cb Merge pull request #331 from timattox/USER-DPD_fix_example_typo
USER-DPD: fix a typo in the DPD-H example input; update reference output.
2017-01-17 09:08:14 -07:00
5cd856c97f fix spring doc page update 2017-01-17 09:02:56 -07:00
0a2b78acb8 rather than adjusting the communication cutoff, we just print out the minimum value needed and error out
i suspect, this communication cutoff adjustment was included into the code before it was possible to separately set it via comm_modify. stopping with an error message printing the needed/current value is cleaner, in keeping with other modules in LAMMPS and much less problematic.
2017-01-16 15:47:02 -05:00
8360e70f4e update USER-CGDNA examples to follow LAMMPS style 2017-01-13 18:56:45 -05:00
96259ea2d2 Added source code and documentation for USER-CGDNA 2017-01-13 13:36:54 +00:00
d06688bb91 USER-DPD: fix a typo in the DPD-H example input; update reference output. 2017-01-10 12:11:20 -05:00
c301d70333 USER-DPD: update example input and output (see commits 3faa57 and eff7238) 2016-12-22 17:32:41 -05:00
ba96fcc15a USER-DPD: update reference output to reflect changes from commit eff7238 2016-12-22 16:21:05 -05:00
647c6f00ce Merge branch 'grem-feature' of https://github.com/dstelter92/lammps into collected-updates-and-bugfixes 2016-11-22 14:51:19 -05:00
237307eda2 small typo and changes 2016-11-22 12:16:00 -05:00
d58dd4f159 bugfix when parsing mpirun 2016-11-22 12:13:20 -05:00
ae70f1090f added readme for grem examples 2016-11-22 12:05:14 -05:00
ff0441ac16 Merge pull request #286 from akohlmey/small-fixes-and-updates
Collected small fixes and updates
2016-11-22 08:49:46 -07:00
dab232c542 modified temper_grem name to fit conventions, re-ran example to match 2016-11-21 12:02:17 -05:00
2862c20815 Merge branch 'master' into grem-feature 2016-11-18 14:51:46 -05:00
78e018829f Merge branch 'grem-feature' of https://github.com/dstelter92/lammps into grem-feature 2016-11-18 14:48:47 -05:00