Commit Graph

7693 Commits

Author SHA1 Message Date
9c494d0a25 include space in custom formats to show how spaces can be used to separate columns 2025-03-10 13:30:08 -04:00
312bdcbddd correct and clarify statements about the potentials and their relations to each other 2025-03-10 06:26:37 -04:00
79d2346eaa resolve spelling and formatting issues 2025-03-10 06:25:11 -04:00
4be39d6d2b fix typos 2025-03-09 22:46:03 -04:00
9ee1648af2 document removed compute atom/molecule and its equivalent using chunks 2025-03-09 22:21:51 -04:00
ca3d2de44b fix broken URL due to typo 2025-03-09 22:10:52 -04:00
ce10be7492 Merge branch 'develop' into collected-small-fixes 2025-03-08 22:28:31 -05:00
4246fab500 Merge pull request #4462 from jtclemm/BPM
Elastic-plastic bond style
2025-03-08 22:26:05 -05:00
e3cf1dec27 restore original delete_atoms implementation. new version spun off as PR #4492 2025-03-08 17:52:26 -05:00
0a1e3fa26a Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-03-07 12:34:08 -05:00
6e94d83cff add option to synchronize fix halt stop requests across multi-partition runs 2025-03-07 11:40:27 -05:00
22fa86a1b7 add "condense" keyword to delete_atoms what will compact the atom IDs while preserving their order 2025-03-06 20:44:05 -05:00
09c8dc07d8 update statements about what packages support and what not 2025-03-06 11:08:22 -05:00
1531810cc5 add versionadded tag 2025-03-06 03:59:47 -05:00
c16bbf6bb0 Merge branch 'develop' into fix-move-rotate 2025-03-06 03:08:53 -05:00
711d76531f Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-03-04 23:34:36 -05:00
505d295d16 small correction 2025-03-04 23:34:24 -05:00
cc70b5bb89 document some internal styles 2025-03-04 23:15:41 -05:00
885099cf77 Merge branch 'develop' into dhairyaiitb_develop 2025-03-04 21:29:40 -05:00
a229b148d1 Update fix_move.rst 2025-03-04 18:09:19 -05:00
0f20eca322 Merge branch 'develop' into collected-small-fixes 2025-03-03 21:02:19 -05:00
42923179e5 clarify which damping is documented where 2025-03-03 16:32:50 -05:00
7fc4ba9628 move documentation of sign() function to logical location and add version tag 2025-03-02 12:40:32 -05:00
38f8299cfb Merge remote-tracking branch 'github/develop' into fix-dispersion-d3-issues 2025-03-01 00:44:14 -05:00
169c051308 require metal units 2025-03-01 00:20:50 -05:00
9f78d5797b rename "zero" keyword for damping function to "original"
this avoids conflicts with pair style zero when used as a hybrid sub-style.
for backward compatibility the "zero" keyword is still recognized but
is undocumented.
2025-03-01 00:20:00 -05:00
ef5c797a84 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-02-27 23:21:34 -05:00
aaa81b2576 Merge pull request #4475 from lasergyro/patch-1
Update fix_press_langevin.rst to include full equation 13
2025-02-27 03:02:39 -05:00
a99a567f0c add note that dynamic groups are only supported without averaging 2025-02-26 11:12:58 -05:00
9bf19159a4 add block to list of regions with all-variable shape options 2025-02-26 10:42:52 -05:00
b89046d82f Merge branch 'develop' into patch-4 2025-02-26 10:40:41 -05:00
f1e1099ac2 fix typo 2025-02-23 04:46:34 -05:00
7952281f78 Merge branch 'develop' into sync_verlet 2025-02-19 12:33:54 -07:00
a31f4f79b8 Merge branch 'develop' into sync_verlet 2025-02-19 12:32:29 -07:00
abc8954c5c Adding line breaks 2025-02-19 11:28:05 -07:00
90c2175056 Updated rotation and documentation 2025-02-18 20:16:31 -06:00
6fb1f4466c fixed_whitespace 2025-02-18 13:10:07 -06:00
0a1b10faef updated version based on feedback 2025-02-18 12:58:09 -06:00
f5099b7c16 Update fix_press_langevin.rst to include full equation 13
Completest equation 13 to match the [paper](https://pubs.aip.org/jcp/article/141/19/194108/152571/Constant-pressure-and-temperature-discrete-time) and the [implementation](36e739b734/src/fix_press_langevin.cpp (L485-L487)).
2025-02-18 17:15:01 +01:00
5d4a277623 add versionadded tag 2025-02-16 22:51:00 -05:00
9f02f20023 add compute vacf/chunk command 2025-02-16 22:43:28 -05:00
0fb79ae3ff Updated reference 2025-02-14 10:30:50 -06:00
53213fb6ff fix spelling issues 2025-02-13 18:27:08 -05:00
1c65907d72 Merge branch 'develop' into bye-bye-python-zwei 2025-02-13 17:01:39 -05:00
2a2e9919cf remove preliminary (and broken) code for creating planes and update docs, so the PR can be merged 2025-02-13 17:01:13 -05:00
73852524dd Merge branch 'develop' into bye-bye-python-zwei 2025-02-13 03:17:53 -05:00
0f972a87fd adjust some wording for the removal of Python 2.x compatibility 2025-02-12 22:04:18 -05:00
926f336962 add some note about build prerequisites 2025-02-12 21:46:37 -05:00
ba14ce210c Fixing mistakes & clarifying BPM files 2025-02-11 10:42:56 -07:00
f8b13b21ec Merge branch 'develop' into collected-small-changes 2025-02-10 17:57:49 -05:00