Commit Graph

20209 Commits

Author SHA1 Message Date
69a206f720 add diskfree check to fix halt 2020-03-09 16:23:20 -04:00
072ce8947b list errors and warnings from fix halt 2020-03-09 16:23:02 -04:00
50c75b3538 Merge branch 'master' into restart-consistency 2020-03-09 13:41:35 -04:00
903e33d86e Added atom map into example, enforce atom map added to fix_numdiff, added error statement to fix_numdiff.h 2020-03-09 10:33:04 -06:00
d2986b7495 update CMake presets 2020-03-09 11:04:26 -04:00
a0fb7c812c Merge branch 'master' into collected_small_fixes 2020-03-09 10:53:42 -04:00
3be6347ad4 Merge pull request #1924 from akohlmey/rename-user-meso
Rename USER-MESO package to USER-MESODPD
2020-03-09 10:53:22 -04:00
740717d114 add false positives 2020-03-09 10:00:14 -04:00
a6086c279b rename USER-MESO package to USER-MESODPD and update related files and folders 2020-03-09 09:48:49 -04:00
536e7a969a silence compiler warning and provide extra comment about optimization 2020-03-09 09:17:49 -04:00
45902772b7 Merge branch 'minimizer' of github.com:yafshar/lammps into collected_small_fixes 2020-03-09 09:15:40 -04:00
73186e4d26 correction to molecule-ID-increment logic 2020-03-08 16:06:49 -06:00
d717eeba66 Update molecule.rst 2020-03-07 22:57:44 -07:00
2304cdd30d let fix pour know about molecule template molecule IDs 2020-03-07 21:58:47 -07:00
21ae5ac533 groups in molecule templates: docs 2020-03-07 20:03:33 -07:00
475b7dc4f4 provide access to number of local data rows for fixes 2020-03-07 10:58:35 -05:00
6f1d913e7e simplify library interface code to extract peratom or local data from computes 2020-03-07 10:57:51 -05:00
943540b015 bugfix for extracting length of local data through python interface 2020-03-07 10:19:03 -05:00
b77837e3b0 documentation file for the coul/slater styles 2020-03-07 12:40:39 +01:00
337cee7b49 add groups to molecule templates 2020-03-06 22:51:42 -07:00
21e4d92507 another memory correction 2020-03-06 22:49:23 -07:00
1110124627 let 'fix deposit' know about molecule template molecule IDs 2020-03-06 22:04:16 -07:00
5c003b8db2 let create_atoms know about molecule template molecule IDs 2020-03-06 21:38:01 -07:00
e71d298f65 molecule template molecule IDs: error docs 2020-03-06 20:40:34 -07:00
a3eee419a1 minor optimization, avoiding double computation and extra communication 2020-03-06 09:01:28 -06:00
ddc36973f0 final reference info 2020-03-06 14:55:52 +01:00
a70aac2f24 Merge pull request #74 from lammps/master
rebase
2020-03-05 22:49:41 -07:00
980ef8095a include USER-REACTION in "most" preset 2020-03-05 22:57:17 -05:00
bc8fa088be Merge pull request #1822 from jrgissing/bond/react-new-examples-and-package
Bond/react: new examples and repackage
2020-03-05 22:49:53 -05:00
21f2ec3a25 Merge branch 'master' into bond/react-new-examples-and-package 2020-03-05 20:08:19 -07:00
8c48a27c1d fix another display issue in pair style srp docs 2020-03-05 15:39:13 -05:00
c38380afc2 bugfix and small tweak for pair style srp docs 2020-03-05 15:36:15 -05:00
1fb54c307c Merge pull request #1918 from akohlmey/collected-small-fixes
Collected small fixes for the next patch
2020-03-05 15:16:50 -05:00
54a37aa4ef fix spelling issue 2020-03-05 14:43:22 -05:00
0fba0b1bc1 handle empty build type 2020-03-05 14:39:40 -05:00
5a3a5d86d4 reduce compiler warnings and avoid clash with KOKKOS 2020-03-05 14:27:33 -05:00
606eaf61f7 Merge branch 'master' into fix_numerical_differentiation 2020-03-05 09:58:50 -07:00
36ec95c2f5 fixed typo in numdiff example input 2020-03-05 09:55:25 -07:00
fb3a8f5bb1 Merge pull request #1909 from giacomofiorin/colvars-update
Update Colvars to version 2020-02-27
2020-03-05 10:18:01 -05:00
b0c6641f1b tweak compiler flags for Intel and GNU 2020-03-05 10:16:38 -05:00
1642bf5afc always skip deprecated C++ MPI interface 2020-03-05 10:16:21 -05:00
2e8aeaef46 remove mentioning external tex files from contribution guide 2020-03-05 09:21:01 -05:00
d0160cc208 Merge pull request #1915 from akohlmey/cpp-11-cmake-3.10
Require C++11 and CMake 3.10
2020-03-05 09:14:46 -05:00
1ee67c20d9 comments 2020-03-05 11:57:01 +01:00
ca89c460bf remove space 2020-03-05 11:49:02 +01:00
022dd4a4e4 special v evaluation to limite dtv each time v is zeroed 2020-03-05 11:39:48 +01:00
27fdbfa8a1 minor modification of halfstepback with correct dt 2020-03-05 10:49:39 +01:00
ae045e4445 indented note block in fix_num_diff.rst 2020-03-04 19:48:12 -07:00
02bdccbae1 added yyy to false positives 2020-03-04 19:45:13 -07:00
be138d368e Merge branch 'master' into fix_numerical_differentiation 2020-03-04 19:11:39 -07:00