Commit Graph

187 Commits

Author SHA1 Message Date
39f61b6af3 Merge branch 'develop' into pimd_langevin 2023-05-17 17:30:49 -04:00
03d6d54435 remove obsoleted Domain::minimum_image_once() 2023-03-31 17:53:56 -04:00
4d78d987c6 add unmap_inv function 2023-02-24 07:34:58 -05:00
27da716852 getting out of the insurance business :-) 2023-01-23 16:45:41 -05:00
8d9a4d86ba flag member functions without side effect as const 2023-01-05 22:56:30 -05:00
7f4ebaf672 correct triclinic box check 2022-11-23 13:32:13 -05:00
13fcbeda18 remove "box" command 2022-11-21 13:46:59 -05:00
ae1b48b52b use smaller maximum box count for maximum allowed distance 2022-11-17 14:15:30 -05:00
57e42a06af make overloaded alias inline function 2022-11-16 10:02:02 -05:00
925a9a4bb3 use name in capitals for compile time constant 2022-11-16 09:59:02 -05:00
31972fc287 reduce redundant code. avoid Domain::minimum_image() getting "stuck". 2022-11-15 07:40:02 -05:00
ccea984c4c expand pair_only_flag processing to also apply to other suffix handlers 2022-10-31 21:47:40 -04:00
2132b1d904 update developer reference text 2022-10-24 11:08:26 -04:00
cccf3f6f78 change email for contacting LAMMPS developers, add to homepage checker 2022-10-20 20:36:03 -04:00
67f6adebb7 whitespace fixup with dynamic casts 2022-09-10 13:26:38 -04:00
22709b73e2 auto loop optimizations 2022-09-10 03:07:28 -04:00
69b32aef13 Merge remote-tracking branch 'github/develop' into collected-small-changes 2022-08-27 10:12:58 -04:00
a0ffcd9811 can use member variables directly 2022-08-21 23:13:25 -04:00
3ec06dd2c2 improve some error messages in comm, domain and region.cpp 2022-08-19 21:06:00 +08:00
ff9c02f053 improved error messages in pair and input.cpp 2022-08-18 21:08:36 +08:00
9beb60c713 improve error messages in change_box,create_box,domain,input,lattice and neighbor.cpp 2022-08-18 11:22:36 +08:00
44e4510251 replace vector for storing regions with unordered_set for simpler processing 2022-04-16 11:17:55 -04:00
aa4787f604 complete region handling refactor 2022-04-16 00:17:39 -04:00
200b4f13c7 use dynamic cast instead of c-style cast when casting from base type to derived class 2022-04-10 18:18:06 -04:00
39b316729b use auto type when assigning from cast or using new 2022-04-10 18:16:36 -04:00
6a0e93a18a convert more style_creators to use local static functions 2022-02-11 18:29:52 -05:00
0bc9f887ec fix index error 2021-10-31 19:46:37 -04:00
212d699078 implement Domain::get_region_by_id() 2021-10-28 23:24:38 -04:00
2857577dda replace find_region_by_style() with get_region_by_style() with same semantics as find_fix_by_style() 2021-10-19 12:38:00 -04:00
5b40e4cb38 new accessor APIs for fixes and computes in Modify plus a few applications 2021-10-16 06:00:28 -04:00
0d8c58db02 synchronize DomainOMP::pbc() code with Domain::pbc() 2021-08-26 07:41:57 -04:00
a7f4bbffcf avoid segfault when trying to apply (strict) pbc or convert to/from fractional coordinates on an MPI rank without atoms 2021-08-26 07:10:47 -04:00
7c61e96f0b Fix bug with v remap option in Kokkos fix deform 2021-08-20 16:08:06 -06:00
09c19a936b update URLs in source code and manual 2021-05-24 14:18:20 -04:00
d1941392d3 disable clang-format for all existing .cpp files (for now) 2021-05-05 23:53:38 -04:00
2a10b5ba69 fix bug causing segfaults 2021-04-02 17:21:34 -04:00
023d42b5bb add support for region style plugins 2021-03-18 18:03:12 -04:00
7936a6296f simplify 2021-03-13 22:52:25 -05:00
c2b9b6d57b fix bug using the wrong flag variable and print warning only if a change was made 2020-11-06 17:14:48 -05:00
adf74b3a22 use https://lammps.sandia.gov based URLs consistently 2020-10-21 16:45:30 -04:00
429cc0cacf add missing updates for symbolic constants in Atom class 2020-09-16 23:19:10 -04:00
0f6a34775c Merge branch 'master' into symbolic-atom-constants 2020-09-15 17:44:31 -04:00
f1ef7d85a8 T2345: Replace instances of NULL with nullptr
The following changes have been applied to src and lib folders:
regex replace: ([^"_])NULL ⇒ \1nullptr (8968 chgs in src, 1153 in lib)
Manually find/change: (void \*) nullptr ⇒ nullptr (1 case)
regex find: ".*?nullptr.*?"
  Manually ~14 cases back to "NULL" in src, ~2 in lib
  regex finds a few false positive where nullptr appears between two
  strings in a function call
2020-09-12 09:34:38 -06:00
9d0c3bc665 replace some numeric constants in Atom and AtomVec classes with enumerators 2020-09-11 19:07:55 -04:00
f88f4cd60e more include file updates 2020-09-02 21:44:04 -04:00
6113169a47 IWYU based include statement cleanup 2020-09-02 17:39:34 -04:00
315c829bd2 tweak box output format to include decimal point 2020-07-13 15:59:47 -04:00
da66516dec use references when creating styles 2020-07-13 09:40:58 -04:00
7488f22981 reduce excess precision in some output data 2020-06-30 10:11:52 -04:00
f547d66104 Merge branch 'master' into more-fmtlib-and-string
# Conflicts:
#	src/write_restart.cpp
2020-06-05 11:13:44 -04:00