Commit Graph

15761 Commits

Author SHA1 Message Date
a066cbb210 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.txt
2016-01-15 08:18:31 -05:00
7e1972ef8b add message about changes 2016-01-14 22:41:05 -05:00
a1e6d7d24f add a warning, if parameters for nonbonded are missing. 2016-01-14 22:33:27 -05:00
6191b6515e delete pair_style line/lj/omp in anticipation of it being broken with the next update 2016-01-14 22:16:08 -05:00
ba87515112 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14444 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-15 00:35:21 +00:00
51a2504a01 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14443 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-15 00:34:30 +00:00
3e36b2b16b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14442 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-15 00:28:30 +00:00
dc40129746 support marker IMPROPERS in addition to IMPROPER
CGenFF/Charmm-GUI generated parameter files and other recent CHARMM parameter files seem to be using the marker IMPROPERS instead of IMPROPER. with this change, both are recognized and translated to the same number (4).
2016-01-14 19:20:59 -05:00
5bba67f290 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14441 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-14 22:35:15 +00:00
09fb68df71 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14440 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-14 22:33:46 +00:00
7770aa6200 correct logic for assigning molecule ids 2016-01-13 06:18:33 -05:00
4be9cd4bee Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.txt
2016-01-13 06:17:50 -05:00
cd1f4ae7f0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14438 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 22:29:26 +00:00
7bd6ae2d6a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14437 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 22:28:35 +00:00
843814f7a3 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14436 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 22:25:33 +00:00
9dcf6ee717 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14435 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 22:25:10 +00:00
a34b9f17da git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14433 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 16:48:49 +00:00
dc385fcbd1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14432 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 16:47:56 +00:00
395397d30b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14431 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 16:34:59 +00:00
2520edf91e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14430 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 16:27:53 +00:00
b9ab7a0cd5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14429 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 16:27:19 +00:00
fbd03b390f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14428 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 16:24:33 +00:00
607c4aa2a3 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.html
#	doc/Manual.txt
#	src/USER-SMTBQ/pair_smtbq.cpp
2016-01-12 07:02:29 -05:00
05240f9467 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14427 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 00:43:44 +00:00
0da05dcdf4 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14426 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 00:29:49 +00:00
20cc9e51cd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14425 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 00:13:11 +00:00
4e199dd5bd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14424 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-12 00:12:15 +00:00
12c8aaf29d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14423 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 23:38:16 +00:00
681ebfaf8f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14422 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 23:34:59 +00:00
e72cef0c3a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14421 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 22:00:29 +00:00
e24ed78dd1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14420 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 22:00:15 +00:00
d3f534f5cc git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14419 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 22:00:09 +00:00
f5946c73f7 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14418 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 22:00:04 +00:00
7ae65d4dcf git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14417 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 22:00:02 +00:00
b5086e3d69 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14416 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 21:59:49 +00:00
173d4861a2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14415 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 21:59:38 +00:00
9e4140c954 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14413 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 18:57:20 +00:00
eb20bcf183 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14412 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 18:56:25 +00:00
eb063200bf git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14411 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 17:59:15 +00:00
e86cfe431a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14410 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 17:58:37 +00:00
51745e2c95 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14409 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 16:01:39 +00:00
f5cf3008dd added new (fast/small) test example for PCFF with ignore flag set 2016-01-03 16:21:34 -05:00
7550656ce7 add update dipole flag to nose-hoover integrator for extended particles 2015-12-31 11:57:15 -05:00
b62c955bed incorporate fix for segfault by andrew jewett from lammps-users 2015-12-29 19:07:14 -05:00
52312fdca4 run through cleanup script to fix includes and whitespace 2015-12-24 07:48:29 -05:00
47e8ef8cc7 restore bugfix 2015-12-24 07:47:29 -05:00
b921253f3f fix typo 2015-12-24 07:47:18 -05:00
5e8d04a07f Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
# Resolved Conflicts:
#	doc/Manual.txt
2015-12-24 07:44:16 -05:00
06e04df4e3 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14406 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-24 00:03:25 +00:00
41a026ee14 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14405 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-24 00:02:10 +00:00