Commit Graph

317 Commits

Author SHA1 Message Date
754041ee36 minor fix 2023-12-13 11:57:03 -05:00
e1be6c09f7 merge with GHub version 2023-12-13 09:05:27 -07:00
665785f41e adjust 2d box bounds 2023-12-13 09:04:23 -07:00
29cf012061 re-use existing potential file, fix screen/log output, plug memory leaks 2023-12-12 23:28:09 -05:00
e7c330db9d Merge branch 'develop' into snann_slcsa 2023-12-12 22:30:20 -05:00
26d0671337 update compute slcsa example to better align with LAMMPS conventions and move to more appropriate folder 2023-12-12 22:30:15 -05:00
8eaaae1e99 recenter 2d boxes around 0.0 2023-12-06 08:31:41 -05:00
e53b3c76f5 Updated doc pages for the added pair styles, added a cmake preset for gpu-cuda, added "comm_modify vel yes" to in.mdpd 2023-12-05 15:32:57 -06:00
e5ae46a01a update compute pace example to follow usual conventions 2023-12-05 06:15:40 -05:00
7d8de8301f Merge branch 'develop' into compute-pace-update 2023-12-05 06:05:34 -05:00
82868cd583 Simplify Madelung examples with mixed eta 2023-12-04 13:59:07 +01:00
4035291a48 Merge branch 'develop' into collected-small-changes 2023-12-02 08:17:11 -05:00
ef2a420aeb modernize 2023-12-01 17:16:25 -05:00
00be75e084 update example inputs and logs for change in ReaxFF required name 2023-11-30 10:31:08 -05:00
7f2a6b1a85 update h2 fix pimd/langevin example 2023-11-16 12:00:29 -05:00
a651697d2e Mix eta in Electrode package 2023-11-13 14:41:13 +01:00
db4f55b76f compatibility with new lammps-user-pace library and cleanup 2023-09-19 17:24:15 -06:00
999c364b83 better way to list rxn counts 2023-08-25 21:44:42 -04:00
476446d93c add reference log outputs for ML-HDNNP and add input demoing use with hybrid 2023-08-23 08:58:20 -04:00
3a10888a6d merge electrode changes 2023-08-04 17:03:44 +10:00
2305c4cb30 Merge branch 'develop' into cmake-3.16 2023-08-03 17:39:15 -04:00
378ef4b23e require CMake version 3.16 2023-06-30 22:59:41 -04:00
c1213c5222 use dynamic/dof and extra/dof consistently. remove compatibility note in docs. 2023-06-30 16:27:07 -04:00
4faebaf4ed add log files for fix pimd/langevin 2023-06-14 14:53:06 -04:00
b7afe412dc Updating SDPD examples 2023-06-07 13:08:46 -06:00
73693ca25b Merge pull request #3787 from oywg11/ilp-water-graphene
Registry-Dependent Potential for Interfaces of Water with Graphene
2023-06-07 11:48:43 -04:00
bf8a4402ce update log files in the examples 2023-06-04 10:17:21 +08:00
63f3d183fe rename log files of examples 2023-06-03 23:02:45 +08:00
f507e30d36 update input files of examples 2023-06-03 22:52:45 +08:00
59bdb136dc added qtotal keyword 2023-05-31 14:50:55 +00:00
bbff6c25b3 add examples 2023-05-18 22:01:19 +08:00
39f61b6af3 Merge branch 'develop' into pimd_langevin 2023-05-17 17:30:49 -04:00
7c723b4852 add support for a region keyword to fix edpd/source and fix tdpd/source 2023-04-21 17:58:28 -04:00
561f80ccc7 add example for fix pimd/langevin with reduced units 2023-03-27 22:21:38 -04:00
ed8b06a756 Merge pull request #3628 from lammps/fix-mdi-qmmm
Add a fix mdi/qmmm command for running QMMM via MDI code coupling
2023-03-23 12:33:00 -04:00
f94bea8d97 correct fix pimd/langevin example file permission 2023-03-21 09:22:37 -04:00
7a38f49a21 add lj example for fix pimd/langevin 2023-03-20 14:10:09 -04:00
c472821d67 remove outdated MDI example folder 2023-03-14 23:31:16 -04:00
2d8936068e Merge pull request #3679 from ndtrung81/dielectric-bugfixes
Dielectric package doc update and bugfix
2023-03-13 18:27:50 -04:00
6cb45a5e0f update minimal MDI test/demo for current code 2023-03-12 17:08:17 -04:00
c2d0734bc4 rerun updated examples and record log files 2023-03-07 14:36:56 -05:00
a3c9029664 Reverted the cutoff to 20.0 for in.nopbc 2023-03-07 12:02:56 -06:00
b65623ef1f Added back comments to data.sphere 2023-03-07 11:57:49 -06:00
9e57bedea2 Fixed bugs when mistakenly replacing all "NULL" with "nullptr" with FixPolarizeFunctional, reduced the number of induced charges so that in.nopbc with dof finishes in a reasonable time 2023-03-07 11:51:14 -06:00
353e0820e3 capture log files for dielectric examples 2023-03-07 12:26:43 -05:00
b08fe855a1 Increased the default max iterations to 50, put a note on setting the local epsilon for charged interface particles to be the mean dielectric value 2023-03-02 15:12:59 -06:00
765d792f40 Merge remote-tracking branch 'github/develop' into collected-small-changes 2023-03-01 21:03:03 -05:00
c8696478b7 Merge pull request #3648 from jrgissing/bond/react-updates+tests
Bond/react updates
2023-03-01 21:01:59 -05:00
202a22ea68 Merge branch 'develop' into collected-small-changes 2023-02-28 11:27:26 -05:00
446913f2f3 make ramp more flexible by defining lambda through a variable 2023-02-27 16:01:17 -05:00