Commit Graph

130 Commits

Author SHA1 Message Date
a3603ca40f Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/USER-OMP/msm_omp.h
2013-03-16 10:18:47 +01:00
a200f0ae38 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9661 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-03-13 15:43:17 +00:00
1466a253d1 Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
	src/USER-OMP/pair_lj_cut_tip4p_long_omp.h
	src/modify.cpp
2013-02-15 13:43:13 +01:00
fa5eb19f26 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9500 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-02-14 23:13:33 +00:00
6bcf83444e Merge branch 'master' into lammps-icms 2012-12-10 03:58:20 -05:00
212d8954dd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9146 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-12-06 23:48:51 +00:00
ce7ea49079 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/USER-OMP/pair_lj_cut_tip4p_long_proxy_omp.cpp
2012-10-22 04:18:55 -04:00
0e28d227fe git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8981 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-10-19 15:50:04 +00:00
9a0e9670fb Merge branch 'master' into lammps-icms
Resolved Conflicts:
	doc/Eqs/pair_gauss.jpg
	lib/cuda/Makefile.common
	lib/cuda/Makefile.defaults
	lib/cuda/Makefile.lammps
	lib/cuda/cuda_wrapper_cu.h
	lib/cuda/pair_cg_cmm_coul_cut_cuda.cu
	lib/cuda/pair_cg_cmm_coul_cut_cuda_cu.h
	lib/cuda/pair_cg_cmm_coul_debye_cuda.cu
	lib/cuda/pair_cg_cmm_coul_debye_cuda_cu.h
	lib/cuda/pair_cg_cmm_coul_long_cuda.cu
	lib/cuda/pair_cg_cmm_coul_long_cuda_cu.h
	lib/cuda/pair_cg_cmm_cuda.cu
	lib/cuda/pair_cg_cmm_cuda_cu.h
	lib/cuda/pair_cg_cmm_cuda_kernel_nc.cu
2012-10-12 08:46:39 -04:00
e909744928 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8910 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-10-05 15:24:56 +00:00
b912c81417 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8909 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-10-05 15:21:54 +00:00
86b3cbad71 Merge branch 'master' into lammps-icms 2012-08-09 08:30:27 -04:00
a897f70c43 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8582 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-08-08 17:17:42 +00:00
96666c6712 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/change_box.cpp
	src/pair_hybrid.cpp
	src/read_data.cpp
	tools/restart2data.cpp
2012-05-18 10:10:23 -04:00
69452129e4 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8071 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-05-17 19:36:30 +00:00
d8a5a293e8 add support for handling disabled bonds/angles/... 2012-05-04 17:49:36 -04:00
0c73ba06a7 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	tools/restart2data.cpp
2012-03-30 09:56:17 -04:00
567878bc65 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7999 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-03-29 14:50:01 +00:00
8e8e887554 add support for lj/*/coul/pppm/omp styles 2012-03-05 15:11:30 -05:00
a9b765721b Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/GPU/pppm_gpu.h
2012-02-15 09:42:34 -05:00
9add1067ad git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7789 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-14 20:44:45 +00:00
dd0057e650 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/USER-MISC/pair_meam_spline.h
	tools/pymol_asphere/src/error.cpp
	tools/restart2data.cpp
2012-02-04 13:12:51 -05:00
905b59d00c restart2data support for meam/spline 2012-02-03 23:12:31 -05:00
9b3b8d2f3a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7682 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-03 15:53:39 +00:00
474e194e48 atom_style dipole bugfix, new commandline flags
add support for pair style dipole/sf and angle style dipole.
fix bug related to recent changes in restart file format.
add command line flags to skip writing coefficient and velocities
2012-02-02 21:02:03 -05:00
2c42373bc8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7644 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-01 16:07:44 +00:00
110e883827 correct support for coarse grain angle potentials. 2012-01-31 21:01:47 -05:00
7c72ca1422 add support for comb pair style 2012-01-07 20:56:00 -05:00
4ae1ca521c Merge branch 'master' into lammps-icms
Resolved Conflicts:
	lib/linalg/Makefile.gfortran
	lib/linalg/Makefile.mingw_cross
	src/GPU/pppm_gpu.cpp
	src/USER-REAXC/pair_reax_c.h
	tools/restart2data.cpp
2012-01-07 12:04:28 -05:00
edcd54b2eb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7433 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-01-06 17:36:55 +00:00
2214992035 Merge branch 'openmp-master' into lammps-icms
Resolved Conflicts:
	.gitignore
	doc/fix_spring_self.txt
	lib/atc/Array.h
	lib/gpu/.gitignore
	src/.gitignore
	src/MAKE/Makefile.openmpi
	src/MAKE/Makefile.openmpi-omp
	src/STUBS/Makefile
	src/STUBS/mpi.c
	src/STUBS/mpi.h
	src/USER-CG-CMM/cg_cmm_parms.h
	src/dump.h
	src/fix_spring_self.cpp
	tools/restart2data.cpp
2011-12-31 19:59:13 -05:00
9259ae8699 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	doc/Eqs/pair_coul_diel.jpg
	doc/Section_commands.html
	doc/Section_commands.txt
	doc/pair_coul_diel.html
	doc/pair_coul_diel.txt
	doc/processors.html
	doc/processors.txt
	examples/USER/imd/bucky_cnt_imd.vmd
	examples/USER/imd/in.bucky-plus-cnt
	examples/USER/imd/in.deca-ala-solv_imd
	examples/USER/imd/in.deca-ala_imd
	lib/gpu/Makefile.fermi
	lib/gpu/Makefile.lincoln
	lib/gpu/Makefile.longhorn
	lib/gpu/Makefile.serial
	lib/gpu/geryon/VERSION.txt
	lib/gpu/pair_gpu_device.cpp
	src/ASPHERE/atom_vec_ellipsoid.cpp
	src/CLASS2/Install.sh
	src/COLLOID/atom_vec_colloid.cpp
	src/DIPOLE/atom_vec_dipole.cpp
	src/GPU/fix_gpu.cpp
	src/GRANULAR/atom_vec_granular.cpp
	src/GRANULAR/fix_pour.h
	src/KSPACE/Install.sh
	src/KSPACE/fft3d.cpp
	src/KSPACE/fft3d.h
	src/KSPACE/kissfft.h
	src/KSPACE/pppm.cpp
	src/KSPACE/pppm.h
	src/KSPACE/pppm_tip4p.cpp
	src/MAKE/Makefile.openmpi
	src/MAKE/Makefile.serial
	src/MANYBODY/pair_airebo.cpp
	src/MANYBODY/pair_comb.cpp
	src/MANYBODY/pair_eam.cpp
	src/MANYBODY/pair_eim.cpp
	src/MANYBODY/pair_sw.cpp
	src/MANYBODY/pair_tersoff.cpp
	src/MANYBODY/pair_tersoff_zbl.cpp
	src/MOLECULE/atom_vec_angle.cpp
	src/MOLECULE/atom_vec_bond.cpp
	src/MOLECULE/atom_vec_full.cpp
	src/MOLECULE/atom_vec_molecular.cpp
	src/Makefile
	src/Makefile.lib
	src/PERI/atom_vec_peri.cpp
	src/USER-CG-CMM/Install.sh
	src/USER-IMD/README
	src/USER-IMD/fix_imd.cpp
	src/USER-IMD/fix_imd.h
	src/USER-SMD/Install.sh
	src/atom_vec_atomic.cpp
	src/atom_vec_charge.cpp
	src/comm.cpp
	src/finish.cpp
	src/fix_box_relax.cpp
	src/fix_deposit.cpp
	src/fix_spring_self.cpp
	src/fix_store_state.cpp
	src/fix_wall.cpp
	src/fix_wall_reflect.cpp
	src/input.cpp
	src/input.h
	src/memory.cpp
	src/memory.h
	src/pair_lj_cut.cpp
	tools/restart2data.cpp
2011-12-31 19:07:46 -05:00
8a282d8b8a updates to restart2data
- fix segfault when running without arguments
- add/correct support for pair styles:
   coul/diel, coul/long, gauss, gauss/cut, lj/sdk,
   lj/sdk/coul/long, rebo, tersoff/table
- avoid printing NULL pointers
2011-12-12 22:37:35 -05:00
5a03365db1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7179 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-10-24 17:46:58 +00:00
4c107e07a4 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7017 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-30 16:03:38 +00:00
b806706398 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6972 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-15 14:26:58 +00:00
1ce29fc9a1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6656 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-08-08 23:10:20 +00:00
5d163c9505 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6469 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-23 14:09:25 +00:00
c6d9d554f0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6468 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-23 13:43:02 +00:00
fe953700a5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6461 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-22 13:41:43 +00:00
b303b5b852 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6338 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-08 20:23:37 +00:00
2be078632d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6052 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-05-02 15:02:09 +00:00
e2d5478a6c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5951 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-04-15 22:57:52 +00:00
17f9667059 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5933 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-04-13 21:40:28 +00:00
b2f9d754c2 Merge branch 'master' into lammps-icms 2011-02-16 08:59:23 -05:00
8b7754f68a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5646 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-02-15 19:26:53 +00:00
de4585af19 use preprocessing to include BIGINT_FORMAT
this reverts the output for bigint_t type variables
to the same style that is used now in LAMMPS and
avoids using sprintf().
2011-02-01 10:38:55 -05:00
fbe0cbe012 add some missing big integer format descriptors
synchronize BIGINT definition and format with lmptypes.h
2011-02-01 10:17:39 -05:00
fa493de199 Merge branch 'master' into lammps-icms
Conflicts resolved in following files.
	lib/gpu/cmm_cut_gpu.cpp
	lib/gpu/cmmc_long_gpu.cpp
	lib/gpu/gb_gpu.cpp
	lib/gpu/gb_gpu_memory.cpp
	lib/gpu/lj96_cut_gpu.cpp
	lib/gpu/lj_cut_gpu.cpp
	lib/gpu/ljc_cut_gpu.cpp
	lib/gpu/ljcl_cut_gpu.cpp
	lib/gpu/pair_gpu_balance.h
	lib/gpu/pair_gpu_device.cpp
	lib/gpu/pair_gpu_device.h
	src/GPU/fix_gpu.cpp
	tools/restart2data.cpp
2011-01-13 13:14:47 -05:00
11e80405e1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5542 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-12 15:28:26 +00:00