Commit Graph

464 Commits

Author SHA1 Message Date
8dae5d5fc7 Added special_bonds command to input files 2020-07-03 21:03:24 +01:00
284efadf9b adjust USER-QTB examples to match more closely with LAMMPS' style. add log files. 2020-06-25 17:22:16 -04:00
a519ff2909 Fix broken QTB examples 2020-06-25 13:02:02 -06:00
f812b94e40 Update relative paths to dynamic links 2020-06-23 14:23:41 -07:00
6fbcb84819 Update dynamical matrix examples 2020-06-22 15:26:04 -07:00
3abbf57146 remove executable permissions on files that should not have them 2020-06-15 17:34:21 -04:00
9aee8d41bd Merge branch 'master' into collected-small-changes 2020-06-15 12:12:45 -04:00
8d5452d653 must use fabs() instead of abs() on floating point values. update cauchystat example logs 2020-06-13 01:39:55 -04:00
ba5e78b97a move pair style mesocnt example to the USER-MESONT folder. unbundle potential file 2020-06-12 06:33:45 -04:00
cf5c748fb4 Merge branch 'master' into feature-cnt 2020-06-12 05:53:17 -04:00
0bc1c3b2a2 update example logs and inputs 2020-06-12 05:48:49 -04:00
ecc142229d update outputs again 2020-06-09 15:09:45 -04:00
999ed36e6a update log files for new version 2020-06-09 15:04:53 -04:00
7088746e36 update logs 2020-06-06 11:59:38 -04:00
d343d2beb1 whitespace and output fixes. 2020-06-06 11:10:32 -04:00
8bfabcab56 update fix orient/eco example to be aligned with LAMMPS conventions 2020-06-06 10:36:35 -04:00
cbd4f59d45 updates "add eco df"
We think we followed all your requests/advice/suggestions (thanks!). We were unable to compile the current master (!) on Ubuntu and MacOS unless we added -std=c++11 to the Makefile(s) compiler flags. Note that this is NOT related to this pull request / the ECO Force. With  this compiler flag, the current master works well with the fix_orient_eco (now renamed). The fix has been moved to USER-MISC (but we hope to get it to MISC later). We can't "make style_check ", but we have added our command to commands_fix.rst. We don't know GitHub well enough, so we don't know how to make sure that the PR #2122 was already included in the master, which we downloaded today.
2020-06-05 14:57:59 +02:00
ed43c1e22b Merge branch 'master' into feature-cnt 2020-05-18 18:23:16 -04:00
e26be18b1e update 2020-05-18 17:28:48 -04:00
25632992f4 updates to USER-SPH example scripts 2020-05-06 16:25:07 -06:00
1225f7d1e0 small changes to examples scripts for regression purposes 2020-05-06 15:28:27 -06:00
3bebf017c0 Rename log.22Apr20.tiny_nylon.unstabilized.g++.4 to log.22Apr20.tiny_nylon.stabilized_variable_probability.g++.4 2020-04-25 15:05:32 +02:00
a6c3f2c0e3 Rename log.22Apr20.tiny_nylon.unstabilized.g++.1 to log.22Apr20.tiny_nylon.stabilized_variable_probability.g++.1 2020-04-25 15:04:46 +02:00
643ef2e2bc return of the data file 2020-04-24 22:59:20 -06:00
7a366de0a9 Delete log.22Apr20.tiny_nylon.unstabilized.g++ 2020-04-24 09:39:11 +02:00
5a9cc9e380 updated log files 2020-04-24 09:35:32 +02:00
1751a27ff6 removing example script from nylon melt and adding to tiny nylon 2020-04-22 14:07:11 +02:00
0288bb4b6b small modification to fix bond/react to allow equal style variables as probability o
On branch master
Your branch is up to date with 'origin/master'.

Changes to be committed:
	modified:   doc/src/fix_bond_react.rst
	new file:   examples/USER/reaction/nylon,6-6_melt/in.large_nylon_melt_variable_probability
	modified:   src/USER-REACTION/fix_bond_react.cpp
	modified:   src/USER-REACTION/fix_bond_react.h
2020-04-22 13:27:10 +02:00
fa4ef70829 code issues 2020-03-25 20:18:07 -04:00
a8fc2005d4 Merge branch 'master' into feature-cnt 2020-03-20 14:35:57 -04:00
53ccc4c607 fix code related issues 2020-03-20 14:21:24 -04:00
164bf1b60e Merge pull request #1883 from evoyiatzis/master
Coulomb pair style with smeared out charges (coul/slater)
2020-03-18 20:52:47 -04:00
ca1e1e2dff Convert British spelling to American 2020-03-18 23:09:23 +09:00
649a8cc01a Fix typo 2020-03-14 13:57:48 +09:00
8af9d40392 Update DOI resolver
https://www.doi.org/doi_handbook/2_Numbering.html#htmlencoding
2020-03-12 16:53:24 +09:00
a6086c279b rename USER-MESO package to USER-MESODPD and update related files and folders 2020-03-09 09:48:49 -04:00
bdbbe00ec7 Merge branch 'master' into feature-cnt 2020-03-06 18:41:38 -05:00
21f2ec3a25 Merge branch 'master' into bond/react-new-examples-and-package 2020-03-05 20:08:19 -07:00
6e7e365981 Merge pull request #1888 from lammps/release-preparation
Documentation and Build script and Info updates for stable release
2020-02-27 13:23:08 -05:00
d89db2ac2a files generated by the in.slater example script 2020-02-27 16:03:07 +01:00
7849de15b0 Create in.slater 2020-02-27 16:01:38 +01:00
275626a1de re-enable perpertual neighborlist for compute entropy/atom if avg flag is used only 2020-02-26 13:57:11 -05:00
02e287bf51 convert pair styles dpd to exp6 2020-02-24 15:41:16 -05:00
ec887b37da Merge branch 'master' of https://github.com/lammps/lammps into bond/react-new-examples-and-package 2020-02-17 21:34:20 -07:00
4cacc4701d update plumed support to include version 2.6.0. Fix bug in API check 2020-02-13 16:03:58 +01:00
0204bf286b CNT package
The tubular potential model (TPM) force field for Carbon Nanotubes (CNTs) package.
2020-02-06 16:50:38 -05:00
795a872bf3 Merge pull request #1847 from pdebuyl/fix-active
Add fix propel/self
2020-01-20 16:57:04 -05:00
41cfb91d7d Reformat README and mention about the timeout option 2020-01-20 15:55:31 -05:00
44a814ec1d Added 'timeout <value>' option to the adios reader, so that a rerun can concurrently run with the first simulation 2020-01-20 15:52:21 -05:00
95d3b9e708 Change BPFile to BP4 in adios config so that streaming through files is enabled 2020-01-20 14:35:51 -05:00