Commit Graph

23688 Commits

Author SHA1 Message Date
1a0095e51b Use utils::logmesg() and fmt::format() 2020-06-23 08:32:17 -04:00
b9d989769d pair style zbl does not have restart support 2020-06-23 08:26:55 -04:00
2e48ea8680 include MLIAP package in cross-compiler builds 2020-06-23 07:11:30 -04:00
66414067c8 add tests for SNAP package 2020-06-23 06:51:42 -04:00
fae96f07d9 single_enable and respa_enable may only be set if *all* styles support it. 2020-06-23 06:51:10 -04:00
3d6095c278 Merge branch 'master' into pair-potential-file-unit-convert 2020-06-23 05:40:32 -04:00
1e8ea3af82 add comparisons for pressure (atm vs. bar) 2020-06-23 00:10:46 -04:00
bfef46539f add unit conversion test for pair style sw 2020-06-22 23:29:33 -04:00
fc197ce2aa add transparent unit conversion to pair style sw 2020-06-22 23:29:15 -04:00
a7436a7b76 adjust lj/cut parameters to produce smaller forces 2020-06-22 23:28:58 -04:00
0d7aed3234 remove debug code 2020-06-22 23:28:18 -04:00
516a31796e need to move destruction of base per-atom properties back to atom.cpp so we don't leak memory in read_restart and don't crash with replicate 2020-06-22 23:12:11 -04:00
a0fdb6af47 silence compiler warning 2020-06-22 22:34:08 -04:00
fc090c22f4 fix typo 2020-06-22 22:24:06 -04:00
ae0957bd61 use atom id instead of local index to test per-atom data 2020-06-22 22:19:55 -04:00
13d56f3cad Merge branch 'master' into test-updates 2020-06-22 21:00:33 -04:00
669e8e6fc9 Merge remote-tracking branch 'github/master' into mliap 2020-06-22 20:58:29 -04:00
5e1187832f Merge pull request #2181 from akohlmey/redo-msm-leak-fix
Redo MSM leak fix with fewer modifications to the code
2020-06-22 20:57:59 -04:00
5291a4611c Merge pull request #2180 from akohlmey/atomvec-deallocate-fix
Deallocate per-atom data less aggressively so replicate command keeps working
2020-06-22 20:53:27 -04:00
132afb32f4 add note about dependency on SNAP in the MLIAP overview page 2020-06-22 19:46:44 -04:00
8d5a9ad4af implement alternate version of MSM leak fix 2020-06-22 19:28:24 -04:00
afe6484c44 Revert "reorganize memory (de-)allocation and fix substantial memory leak in MSM"
This reverts commit f78671c1a4.
2020-06-22 19:15:28 -04:00
198258766d ensure that per-arrays are only freed if the last atom style instance is deleted 2020-06-22 18:59:09 -04:00
6fbcb84819 Update dynamical matrix examples 2020-06-22 15:26:04 -07:00
b29b3d52f6 initial implementation of automated unit conversion.
this includes a tester program and implementation into pair style tersoff
2020-06-22 17:57:05 -04:00
3fffe20463 Merge pull request #2172 from weinbe2/fea-snap-yi-aosoa
SNAP optimizations - AoSoA data layouts, chem snap indexing conventions, misc perf improvements
2020-06-22 13:54:06 -04:00
6e714fec42 fix underline 2020-06-22 13:40:30 -04:00
73ed317254 Added compute_mliap.cpp/h to MLIAP package 2020-06-22 11:38:02 -06:00
1f3c3bfb3c snap is listed twice 2020-06-22 13:30:54 -04:00
ac48f2dd67 add a hard dependency of MLIAP on SNAP 2020-06-22 13:30:43 -04:00
b0dd93f06f Whitespace tweak 2020-06-22 10:50:31 -06:00
5a1882e00d Merge branch 'mliap' of github.com:athomps/lammps into mliap 2020-06-22 12:01:34 -04:00
18597a6389 Removed computes 2020-06-22 10:00:19 -06:00
8eb6c2e037 Merge branch 'mliap' of github.com:athomps/lammps into mliap 2020-06-22 11:40:22 -04:00
743a14aea0 Fixed incomplete documentation entries for mliap 2020-06-22 09:35:16 -06:00
233b56105a Merge branch 'master' into mliap 2020-06-22 11:24:49 -04:00
75114afc0e integrate MLIAP package into CMake procedure 2020-06-22 11:24:44 -04:00
bbd9af0d6f Fixed a few minor problems 2020-06-22 09:11:38 -06:00
10ace11c0b Fixed spelling and false positives 2020-06-21 21:10:03 -06:00
9238c2a624 Finished first version of MLIAP package 2020-06-21 19:57:08 -06:00
549c6343f3 Merged MLIAP package into latest LAMMPS created SNAP, quadratic SNAP, and ChemSNAP examples 2020-06-21 18:05:34 -06:00
564974b6a4 Merge remote-tracking branch 'origin/ml_chem_snap' 2020-06-21 16:07:03 -06:00
ab42123005 add test for atom style sphere 2020-06-21 16:56:04 -04:00
a98d03ee0e add missing linefeed 2020-06-21 16:55:55 -04:00
7bb4a2a81a Fix a typo in the GPU Docs 2020-06-21 19:37:59 +03:00
0ba701acd7 Remove trailing space 2020-06-20 17:25:16 +03:00
723b9e6760 Try to keep compatibility with deprecated ROCm hcc compiler 2020-06-20 15:17:54 +03:00
55d6f1a34f Fixed variable name to be more consistent with rest of code. 2020-06-19 19:33:17 -04:00
f5a31fefdc Merge pull request #2171 from athomps/orientorder-components-parity
Switched the sign of spherical harmonics for m odd
2020-06-19 18:46:15 -04:00
9f6b2e97b1 Merge pull request #2169 from lammps/hyper-debug
Tweaks to local hyper dynamics
2020-06-19 17:17:56 -04:00