Commit Graph

23688 Commits

Author SHA1 Message Date
c82df186b5 Disable zstd tests if library is too old 2020-09-16 15:18:28 -04:00
ccc743e13e Add test for thermo data 2020-09-16 15:14:05 -04:00
bd542efa52 include math_eigen.h, remove it from .gitignore 2020-09-16 14:12:14 -04:00
0931cdd109 relax epsilon for rigid body integrators 2020-09-16 14:07:28 -04:00
fd9e39bf1a update docs 2020-09-16 14:07:06 -04:00
10991ee638 separate the MathEigen implementation into its own header file 2020-09-16 14:06:58 -04:00
8ccd3c03fa Correct test name 2020-09-16 12:54:36 -04:00
2270d8f4ec Add PyLammps.atoms test and fix bug with -echo screen/both 2020-09-16 12:48:20 -04:00
9cdd35e625 Make sure Python tests run unbuffered so PyLammps works 2020-09-16 11:28:38 -04:00
f7a939dec2 update atom_style tester for new jacobi implementation 2020-09-16 10:25:03 -04:00
ca24806f4c Add tests 2020-09-16 10:11:00 -04:00
981d60f1bd update rigid tests for new eigensolver 2020-09-15 22:47:52 -04:00
48ad860889 only do Zstd tests if it is enabled/found. 2020-09-15 22:47:10 -04:00
f5998692d0 Merge branch 'master' into math_eigen 2020-09-15 21:37:05 -04:00
d611b85d7d Merge pull request #2360 from akohlmey/symbolic-atom-constants
Replace numeric with symbolic constants in Atom and AtomVec classes
2020-09-15 21:27:47 -04:00
38f0a2e24c Fix doc build errors 2020-09-15 19:50:28 -04:00
cf7d2109a3 Merge branch 'library-progguide' into symbolic-atom-constants 2020-09-15 19:50:18 -04:00
4b25eb1a34 small tweaks 2020-09-15 19:08:40 -04:00
88cee4ff09 the library interface is for calling from C, so switch nullptr in comments/docs back to NULL 2020-09-15 19:07:07 -04:00
a3765eb75b Merge branch 'master' into library-progguide 2020-09-15 18:58:29 -04:00
7611efeea2 Update python docs 2020-09-15 18:03:26 -04:00
0f6a34775c Merge branch 'master' into symbolic-atom-constants 2020-09-15 17:44:31 -04:00
cebf6d33ba Merge pull request #2358 from eagunn/iss2345
Replace instances of NULL with nullptr
2020-09-15 17:41:24 -04:00
ae68becf4a Fixed a bug in computing the langevin torques applied to rigid bodies 2020-09-15 15:27:24 -05:00
60712e3f90 Add docstrings 2020-09-15 16:22:43 -04:00
f481a403bc Merge pull request #2366 from akohlmey/msm-fix
Apply alternate bugfix to KSpace style MSM that avoids grid level overflow
2020-09-15 16:22:19 -04:00
556dc67fdc Correct filename of generated image 2020-09-15 15:20:38 -04:00
6cfad41be4 Add background_color argument to IPyLammps.image 2020-09-15 15:19:39 -04:00
e5e449795a Add tests for has_style and available_styles 2020-09-15 15:16:19 -04:00
618b08dcfc Merge branch 'master' into symbolic-atom-constants 2020-09-15 14:58:13 -04:00
3dd3c6a2a5 redo fix for class member shadowing while avoiding overflowing levels 2020-09-15 14:48:55 -04:00
16749566f8 Revert "fix issue with local variable shadowing a global variable"
This reverts commit 3368eb79d8.
2020-09-15 14:42:00 -04:00
2165f6ed38 Merge pull request #2363 from akohlmey/consistent-memory-usage
Make memory usage reporting consistent
2020-09-15 14:21:07 -04:00
baa49984c2 update comments 2020-09-15 14:19:40 -04:00
326d9f398c Merge branch 'master' into iss2345 2020-09-15 14:06:16 -04:00
5cbb54b844 Merge branch 'iss2345' of github.com:eagunn/lammps into iss2345 2020-09-15 14:04:16 -04:00
b5832191d8 Merge pull request #2364 from akohlmey/force-test-bugfix
Force style unit test template bugfix
2020-09-15 13:40:13 -04:00
5da50d64c9 reformulate 2020-09-15 12:32:43 -04:00
2f3c916a57 add unit test for lammps_memory_usage() 2020-09-15 12:29:03 -04:00
3576464268 Merge branch 'master' into consistent-memory-usage 2020-09-15 12:25:16 -04:00
9490370eb0 Use consistent naming in PyLAMMPS classes 2020-09-15 12:22:36 -04:00
2c30de65d2 Fix typos in docstring 2020-09-15 12:16:47 -04:00
165444004e Merge pull request #2362 from akohlmey/library-progguide
Updates to C-Library interface progammer guide and reference
2020-09-15 11:51:02 -04:00
db59abf1b9 fix bug in lammps_has_style() 2020-09-15 11:34:24 -04:00
4a48ce76b8 Merge remote-tracking branch 'origin/master' into python_interface_guide 2020-09-15 11:34:16 -04:00
c6bc21febf Merge pull request #2361 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2020-09-15 11:28:25 -04:00
2f3c73217b detect if dt has been changed from default and print warning if reset by units command 2020-09-15 10:50:44 -04:00
b20b234ebe Merge remote-tracking branch 'origin/master' into python_interface_guide 2020-09-15 10:45:28 -04:00
e30864431f add test for missing quartic bond style 2020-09-15 10:12:18 -04:00
2794108837 don't update per-atom pair data if not available 2020-09-15 10:12:07 -04:00