Commit Graph

3892 Commits

Author SHA1 Message Date
3ebd194090 update documentation for unit testing to include timestepping fix tests 2020-08-09 08:18:35 -04:00
62a501ebda store cumulative energy change in restart file 2020-08-09 01:27:14 -04:00
15db052c80 Merge branch 'master' into collected-small-changes 2020-08-05 22:10:10 -04:00
c3075250ee Merge pull request #2273 from abhiShandy/pair-tests-aug4
Bunch of units tests for pair-style, angle-style, bond-style
2020-08-05 22:09:28 -04:00
1a642d36ae fix typo in the math of pair style dpd doc
- missing closing backticks for math
- V fixed to v for relative velocity
2020-08-04 22:50:26 +02:00
f4aede49dc Merge branch 'master' into multi-comm-tiled 2020-08-03 22:37:23 -04:00
6bc65dc14c reference typos in doc 2020-08-03 20:49:02 -04:00
33aa96b1bf test for buck/mdf, fixed bug in broadcasting inner cutoff, typos in doc 2020-08-03 20:07:24 -04:00
6576c4cbf3 Merge pull request #2260 from akohlmey/collected-small-changes
Collected small changes
2020-08-03 18:02:17 -04:00
8d406403bb fix typo in manual 2020-08-03 16:07:06 -04:00
80ceff55d5 failing test for UFM, with cosmetic change in its CPP, and doc correction 2020-08-03 06:01:59 -04:00
74f50ed1bd Merge branch 'master' into collected-small-changes 2020-07-31 21:51:10 -04:00
1f1263645e Document warning about short communication cutoff vs. bond length based estimate 2020-07-31 11:03:26 -04:00
7d46aa6185 Merge pull request #2256 from akohlmey/cmake-use-alternate-linker
Use alternate/faster linker if available
2020-07-29 21:40:17 -04:00
2fa642d95e document custom linker choice 2020-07-29 18:01:17 -04:00
cb98fa00da enable CommStyle tiled and load-balancing to work for triclinic 2020-07-29 14:30:49 -06:00
cf83ce6745 reset_mol_ids->reset() version 2020-07-25 00:52:39 -06:00
5528d4d18c trim excessive white from images 2020-07-23 00:36:15 -04:00
f60c13c845 fix incorrect link 2020-07-23 00:36:02 -04:00
c21ce0b289 make horizontally aligned image formatting consistent and display "click on" message only with html output 2020-07-23 00:35:49 -04:00
b97f2e5b6b Update compute_saed.rst 2020-07-22 16:48:21 -04:00
bf848c0515 Update compute_xrd.rst 2020-07-22 16:45:56 -04:00
1123add481 Update create_atoms.rst 2020-07-22 16:44:04 -04:00
7f66099732 Update dump_image.rst 2020-07-22 16:41:59 -04:00
b664050e28 Update src/neb.rst 2020-07-22 16:39:18 -04:00
22a1e452ce Update fix_wall_gran_region.rst 2020-07-22 16:35:45 -04:00
e82367b530 Update balance.rst and fix_balance.rst 2020-07-22 16:31:31 -04:00
e6f7a99ae2 Update Python_examples.rst 2020-07-22 16:27:04 -04:00
6f58ed1c83 Merge pull request #2248 from rbberger/docs-include-accel-text
Remove duplicated accelerator text passage in docs
2020-07-22 14:14:57 -04:00
89c42d081f Merge pull request #2247 from rbberger/wsl-docs-update
Update Windows Subsystem for Linux Tutorial
2020-07-22 13:47:15 -04:00
f9e7b7dd19 Remove outdated or differently formatted common text blocks 2020-07-21 17:54:33 -04:00
177a93d22d Replace common text block with include 2020-07-21 17:38:56 -04:00
6acc4bc849 Update Windows Subsystem for Linux Tutorial
Fixes #1953
2020-07-21 14:39:08 -04:00
cbdf1d3a64 consolidate mpi4py link 2020-07-20 20:59:47 -04:00
845b918501 probably better reset_mol_id doc version 2020-07-18 20:59:17 -06:00
edd3fb7108 reset_mol_ids: documented verbose option 2020-07-18 20:51:14 -06:00
da91f81d40 bond/react:doc clarification 2020-07-18 13:42:47 -06:00
371a5c5b61 bond/react: reset_mol_ids docs 2020-07-18 12:44:34 -06:00
211beaee48 Merge pull request #2230 from evoyiatzis/widom
Implementation of Widom insertions through a new fix widom command
2020-07-18 11:40:04 -04:00
e98056c0e8 whitespace fixes 2020-07-16 19:03:30 -04:00
31cfc99ad9 add missing empty line 2020-07-16 18:37:16 -04:00
52715cc804 Merge branch 'master' into compute-mliap 2020-07-16 18:35:49 -04:00
209d3ff3ff fix typo 2020-07-16 17:31:46 -04:00
35b030015d Merge branch 'master' into write-bonus-data 2020-07-16 12:15:59 -04:00
25a836b729 reformat and rephrase text about availability of fix bond/create/angle only keyword 2020-07-15 21:32:22 -04:00
52b30b11ec add fix bond/create/angle to list in Fix command page 2020-07-15 21:31:22 -04:00
d7ef1b007d Merge branch 'master' into mc-fix-bond-create-angle 2020-07-15 21:21:35 -04:00
29e2c82d71 fix broken line wrap. 2020-07-15 21:00:43 -04:00
4dc61f7f2a make frenkel book anchors globally unique 2020-07-15 20:56:50 -04:00
300beb819b change from DOS/Windows CR/LF to LF 2020-07-15 20:54:58 -04:00