Commit Graph

15932 Commits

Author SHA1 Message Date
b1186a971e Merge pull request #1202 from lammps/hyper
Add Hyper-dynamics to REPLICA package
2018-11-13 15:17:30 -05:00
2dbd575a4b Merge pull request #1203 from stanmoore1/kk_update
Update Kokkos library in LAMMPS to v2.7.24
2018-11-13 15:15:09 -05:00
380f0e4971 remove some debugging code 2018-11-13 08:06:40 -07:00
a026ce9669 correct broken links detected by make mobi 2018-11-12 21:38:26 -05:00
7e779d16de correct broken links in manual reported by 'make html' 2018-11-12 21:33:37 -05:00
b776f0f29f remove dead code and silence warnings about unused parameters 2018-11-12 21:11:55 -05:00
443644025f silence compiler warnings 2018-11-12 20:50:14 -05:00
c4c90a96ec avoid void return from non-void function 2018-11-12 20:49:01 -05:00
5cb2463204 c++ style include files do not have a .h extension 2018-11-12 20:33:30 -05:00
0ca02b6f41 added new commands to doc pages, fixed a few missing entries as well 2018-11-12 17:23:15 -07:00
2b96dfd6cc Remove deprecated Kokkos code 2018-11-12 15:49:31 -07:00
c22c6e4d34 Add LAMMPS changes to Kokkos Makefile 2018-11-12 15:30:14 -07:00
b2d67bcbb5 Remove tpls dir 2018-11-12 15:18:06 -07:00
b3f08b38a2 Update Kokkos library in LAMMPS to v2.7.24 2018-11-12 15:16:26 -07:00
fe07ad279d added NULL declations to constructor, removed debug code 2018-11-12 12:32:54 -07:00
5062c43aea rename example outputs 2018-11-12 12:32:53 -07:00
90caf0019c fix doc page errors 2018-11-12 12:32:53 -07:00
3b7ebbb8df new hyper examples 2018-11-12 12:32:53 -07:00
d7a479d2f6 hyper example dir 2018-11-12 12:32:52 -07:00
0c8ce199af more updates to hyper docs 2018-11-12 12:32:52 -07:00
4a6f088c0b updates to hyper doc pages 2018-11-12 12:32:52 -07:00
56598fcd0b changes to prd command doc page 2018-11-12 12:32:52 -07:00
265c11dca9 more edits to hyper docs 2018-11-12 12:32:52 -07:00
d6631266ce doc files in wrong dir 2018-11-12 12:32:52 -07:00
fbd610b8a9 global/local hyperdynamics src and doc files 2018-11-12 12:32:52 -07:00
1651a21f92 Merge pull request #1198 from akohlmey/next-patch-release
Patch release 9 November 2018
patch_9Nov2018
2018-11-08 20:49:49 -05:00
cbae3b5afa Merge pull request #1184 from DiscreteLogarithm/sdpd
add USER-SDPD package for Smoothed Dissipative Particle Dynamics
2018-11-08 17:21:21 -05:00
f2a29880e2 patch 9Nov2018 2018-11-08 16:48:43 -05:00
e0955f6434 Merge branch 'master' into sdpd to resolve merge conflicts
# Conflicts:
#	cmake/CMakeLists.txt
#	src/Makefile
2018-11-08 16:32:02 -05:00
3681bc853d Merge pull request #1195 from jrgissing/bond/react-custom_edges
Bond/react: charge update for custom edges
2018-11-08 16:19:23 -05:00
a6e9b99295 Merge pull request #1180 from gtribello/master
Add natively supported PLUMED interface to LAMMPS
2018-11-08 16:16:50 -05:00
893a51ce14 Merge pull request #1191 from akohlmey/msi2lmp-avoid-bad-topology
Dihedral generation bugfix for msi2lmp
2018-11-08 16:10:31 -05:00
80ee08482c Merge pull request #1182 from junghans/pkgconfig_doc
liblammps.pc: add some more documentation
2018-11-08 16:10:15 -05:00
bbb371134d include USER-SDPD package in list of user packages in conventional make 2018-11-06 22:38:02 -05:00
a1e8992eac replace non-ASCII characters 2018-11-06 22:21:19 -05:00
baa7b705b8 improve logic and grammar of error messages 2018-11-06 22:13:38 -05:00
2d12260ade remove bogus single function and set single_enable = 0 2018-11-06 22:13:05 -05:00
31277349c6 remove dead code and avoid compiler warnings 2018-11-06 22:10:27 -05:00
df232c1cf6 use c++ style include files for c-library functions 2018-11-06 22:09:05 -05:00
bdf73f7adb ignore USER-SDPD files when installed 2018-11-06 22:07:35 -05:00
84fcf01bed bond/react: allow custom update of charges near template edges
also, fixes a bug introduced in PR #1189, when not using stabilization
2018-11-06 19:59:22 -07:00
cc0d685e8e Merge pull request #32 from lammps/master
rebase
2018-11-06 19:52:08 -07:00
5196fa37e0 Merge pull request #1194 from ohenrich/user-cgdna
Update reference for USER-CGDNA
2018-11-06 15:52:22 -05:00
4e6253254c Merge branch 'master' into user-cgdna 2018-11-06 19:48:06 +00:00
562296bdb7 Updated link to preprint article 2018-11-06 19:44:35 +00:00
91c4ef6f64 Merge pull request #1189 from jrgissing/bond/react-custom_group
Bond/react custom group support
2018-11-06 10:32:06 -05:00
f46d6a4312 Merge pull request #1192 from julient31/master
update reference for SPIN package
2018-11-06 10:26:27 -05:00
cb828e9579 update reference 2018-11-06 07:48:47 +01:00
ed77701e56 Merge pull request #31 from lammps/master
rebase
2018-11-05 20:25:38 -07:00
7ed6cab040 do not generate illegal dihedrals, e.g. from 3-membered rings 2018-11-05 20:35:43 -05:00