Commit Graph

259 Commits

Author SHA1 Message Date
bd6dd658d6 Updating to master, misc style changes 2021-04-07 17:21:16 -06:00
d54384dd91 Merge branch 'master' into multi_epcc 2021-04-07 16:34:01 -06:00
0bde6c82a3 remove newton bond off check again 2021-03-31 14:40:54 -04:00
183b30abd7 use strmatch() consistently to detect respa and verlet runstyles with optional suffix 2021-03-30 18:30:22 -04:00
e22f9c4768 newton bond off does not work with atom style template currently 2021-03-30 16:48:51 -04:00
d9d5d3a36a Correcting skin distance calculation for collection/interval 2021-03-19 09:29:47 -06:00
b9bc226e39 save style names alongside the classes when using read_data nocoeff
this fixes #2673
2021-03-19 10:06:02 -04:00
58e4938b0f Updating examples, updating multi in info, fixing memory issues in comm/neighbor 2021-02-08 10:50:57 -07:00
de1205c5a9 Fixing misc valgrind issues, particularly with resizing ncollections 2021-02-07 20:38:24 -07:00
56841ba912 Fixing typo in pair gran, fixing bugs in communication and neighbor 2021-02-02 18:05:19 -07:00
d79a2c3a02 Adding collection array, new user arguments, and multi communication 2021-02-02 09:39:13 -07:00
2c92737cd5 Resolve merge conflicts 2021-01-13 09:42:57 -07:00
a25c77e512 Misc comments, typos, and cleanups 2021-01-12 23:04:14 -07:00
382ade15fe more consistent formatting of for/while loops and if statements 2020-12-30 09:09:08 -05:00
2458eaf4f9 Adding custom grouping option 2020-12-26 11:03:29 -07:00
b421c3d676 Adding arguments, initialization, and communication for custom groupings 2020-12-22 10:20:06 -07:00
5ae32146eb Adding full neighbor list check for new reduced comm 2020-12-20 17:18:32 -07:00
0a36baf86d Updating naming in other classes 2020-12-19 17:51:09 -07:00
0549da668d Renaming multi->multi/old, updating lmpcite 2020-12-19 16:06:47 -07:00
c1e3bc5794 Updating to master 2020-12-19 15:28:02 -07:00
f614aa401e build_one() update parent skiplist
if an occasional skip list has an occasional parent list, the parent list must be built when the skip list is built. This patch ensures that behavior. (Otherwise, build_one(foo) returns an empty skip list with no warnings or errors.)
2020-12-16 15:42:10 +10:00
af57879416 Labelling stencils half/full, removing unnecessary newton on/off designation 2020-11-10 17:15:28 -07:00
943a187be7 Renamed to multi2, initial stencil edits 2020-11-10 16:39:56 -07:00
12288630f5 Fixing comm and renaming bytype 2020-11-09 16:32:11 -07:00
adf74b3a22 use https://lammps.sandia.gov based URLs consistently 2020-10-21 16:45:30 -04:00
b1b014aed3 Fixing merge conflicts 2020-10-02 15:09:47 -06:00
429cc0cacf add missing updates for symbolic constants in Atom class 2020-09-16 23:19:10 -04:00
0f6a34775c Merge branch 'master' into symbolic-atom-constants 2020-09-15 17:44:31 -04:00
cebf6d33ba Merge pull request #2358 from eagunn/iss2345
Replace instances of NULL with nullptr
2020-09-15 17:41:24 -04:00
618b08dcfc Merge branch 'master' into symbolic-atom-constants 2020-09-15 14:58:13 -04:00
0183e999c9 consistently return "memory_usage" as double. 2020-09-15 01:59:58 -04:00
93a0d4c096 fix up some comments 2020-09-12 14:26:34 -04:00
f1ef7d85a8 T2345: Replace instances of NULL with nullptr
The following changes have been applied to src and lib folders:
regex replace: ([^"_])NULL ⇒ \1nullptr (8968 chgs in src, 1153 in lib)
Manually find/change: (void \*) nullptr ⇒ nullptr (1 case)
regex find: ".*?nullptr.*?"
  Manually ~14 cases back to "NULL" in src, ~2 in lib
  regex finds a few false positive where nullptr appears between two
  strings in a function call
2020-09-12 09:34:38 -06:00
9d0c3bc665 replace some numeric constants in Atom and AtomVec classes with enumerators 2020-09-11 19:07:55 -04:00
c7c4297cfc update include handling for commands 2020-09-03 00:51:58 -04:00
96d8d12a88 replace calls to force->*numeric() with the corresponding utils::*numeric()
this also removes the now obsolete functions from Force
2020-08-29 20:31:02 -04:00
0008c0eca3 need to setup bins again if binning style has be reset 2020-07-19 12:12:20 -04:00
da66516dec use references when creating styles 2020-07-13 09:40:58 -04:00
edfb4076ff remove dead code and unused variables 2020-06-30 16:32:30 -04:00
d4c7455197 reduce output precision 2020-06-30 13:49:50 -04:00
05f310ef35 move misplaced neighbor list print log out output call 2020-06-26 14:04:32 -04:00
f2a4d12f7e more output simplification with fmtlib, std::string, and utils::logmesg() 2020-06-25 23:48:17 -04:00
eb80fd3031 Add method to copy Kokkos neighbor list to CPU list 2020-02-26 14:26:46 -07:00
ccd395fdd8 remove dead code 2020-01-29 14:34:03 -05:00
78d5bc3d12 Merge branch 'master' into library_interface_update 2019-11-12 15:17:32 -05:00
2bbf52073f Merge pull request #1759 from akohlmey/hybrid-exclusion-bugfix
Consistent exclusion settings with multiple kspace-like sub-styles in pair hybrid
2019-11-06 06:24:35 -05:00
ae4764e614 address pair match issue with multiple hybrid substyles in exclusion settings 2019-11-05 11:03:25 -05:00
b6b022b610 whitespace cleanup: remove trailing blanks 2019-11-03 11:03:39 -05:00
26427cc4cb Fixed error in neighbor distance check for box dimensions 2019-10-01 11:40:21 -06:00
69854eab42 Expose Neighbor lists via library interface 2019-09-12 13:46:05 -04:00