Commit Graph

32758 Commits

Author SHA1 Message Date
f136bcbef7 Merge pull request #3465 from weinbe2/feature/snap-packed-idx
Packed Clebsch-Gordon look-up tables for SNAP/Kokkos
2022-09-30 17:35:10 -04:00
756d24ff9e Implemented vector-style variables in C, Python, and Fortran APIs; unit test and more for Fortran/extract_variable 2022-09-30 16:02:26 -05:00
2538929d76 update tests for recent changes and with more death tests. 2022-09-30 15:06:46 -04:00
cbe83701c1 better checking for valid data for format style variables 2022-09-30 15:06:25 -04:00
b48868d70b better document format style variable behavior 2022-09-30 15:05:56 -04:00
172106717d must match the entire string 2022-09-30 15:05:41 -04:00
a9701f54cb HIP tuning 2022-09-30 14:53:37 -04:00
6669b493a4 Merge branch 'develop' of https://github.com/lammps/lammps into feature/snap-packed-idx 2022-09-30 13:18:27 -04:00
08acd321f1 add more dedicated tests for format style variables 2022-09-30 09:58:05 -04:00
ec0bc5aa5e improve detection of invalid format strings. allow to replace format style variables 2022-09-30 09:57:42 -04:00
fce0877cac update and remove obsolete parts 2022-09-30 09:49:57 -04:00
038ad3a038 portability improvement 2022-09-30 09:02:14 -04:00
8ee17edcab Implemented more unit tests; stuck on atomfile 2022-09-29 23:39:39 -05:00
a7071fea78 Wrote docs for extract_fix,extract_variable; fixed python so it knows about string variables; doc typo fixes; part of extract_variable unit test 2022-09-29 19:28:15 -05:00
afc35aa7b0 Merge pull request #3462 from akohlmey/pdlammps-howto
Add peridynamics howto document
2022-09-29 14:33:46 -04:00
09948f11be make equation references explicit since .. math:: + 🏷️ does not work with latex 2022-09-29 13:54:09 -04:00
6962b43e70 Pack idxcg_block in with idxz 2022-09-29 09:56:20 -07:00
60f73b33bf Merge branch 'develop' into feature/snap-packed-idx 2022-09-29 09:50:33 -07:00
c6eb6d858b implement numbered equations and equation references 2022-09-29 12:04:43 -04:00
96c0d39be2 Merge branch 'develop' into pdlammps-howto 2022-09-29 10:42:34 -04:00
f78c350fa8 Merge pull request #3459 from akohlmey/collected-small-changes
Collected small changes and updates
2022-09-29 10:39:17 -04:00
3ab8f6ea16 Finished docs for everything currently implemented 2022-09-29 09:14:49 -05:00
c068c226cc consolidate fortran test keeper modules into a single module 2022-09-29 09:47:40 -04:00
494821725e Merge pull request #3463 from wmbrownIntel/gpu_timer_hostview_fix
GPU Package - OpenCL Timer Fix and Unnecessary Device Allocation Fix
2022-09-29 08:56:48 -04:00
8e073c3335 reference the Howto from the rest of the manual. Spelling fixes. 2022-09-29 07:43:01 -04:00
777a074744 Convert PDLAMMPS user doc from latex to sphinx 2022-09-29 06:57:52 -04:00
fb675028b9 whitespace 2022-09-29 02:42:11 -04:00
6c0da8cbaf Wrote documentation for extract_fix, extract_variable 2022-09-29 01:07:46 -05:00
71464d8314 GPU Package: Fixing logic in OpenCL backend that could result in unnecessary device allocations. 2022-09-28 22:30:09 -07:00
6e34d21b24 GPU Package: Switching back to timer disabling with multiple MPI tasks per GPU. Logic added to prevent mem leak. 2022-09-28 21:02:16 -07:00
1d4297e2dd Implemented extract_fix, extract_variable, flush_buffers; unit test for extract_fix 2022-09-28 22:09:26 -05:00
e22699197d Added flush_buffers 2022-09-28 07:40:06 -05:00
6109090d40 Merge branch 'lammps:develop' into fortran-further-tinkering 2022-09-27 20:02:06 -05:00
77fb3e8af8 improve error messages 2022-09-27 20:55:55 -04:00
90384371c0 this is redundant, since we set one_coeff and thus * * is required 2022-09-27 20:55:45 -04:00
de28c9b19c propagate new pace lib version tage and hash to lib/pace/Install.py 2022-09-27 15:27:43 -04:00
5da63b1e1d Merge branch 'develop' into feature/pace-al 2022-09-27 14:01:58 -04:00
7fe9d087db move reusable fortran modules to keep data to a separate file 2022-09-27 14:01:01 -04:00
256f385be4 avoid race condition 2022-09-27 13:20:39 -04:00
36d22b9d00 silence compiler warnings 2022-09-27 13:20:25 -04:00
2f231bcd50 update documentation: explain fix_modify pair every N 2022-09-27 17:15:20 +02:00
502fd0eff8 ML-PACE.cmake: update tag and MD5 hashsum
pair_pace_extrapolation.cpp: add log message about type of active set (LINEAR or FULL)
2022-09-27 17:04:16 +02:00
2072e08624 added get_last_error_message; still working on its unit test 2022-09-26 21:56:03 -05:00
3e9dca3017 Implement alternate and recommended way to set properties of abstract base class
See: https://github.com/lammps/lammps/security/code-scanning/476
2022-09-26 21:01:22 -04:00
7238a29cb7 improve version tag regexp to match cases with leading blanks 2022-09-26 20:39:46 -04:00
0fe739eb35 Merge branch 'develop' into collected-small-changes
# Conflicts:
#	doc/utils/sphinx-config/false_positives.txt
2022-09-26 20:34:37 -04:00
be98b5a168 Merge pull request #3458 from Boogie3D/mliappy_unified
MLIAP Unified Interface
2022-09-26 20:33:17 -04:00
1dc3c8fc26 remove hippynn examples 2022-09-26 19:56:00 -04:00
10068a0fde Merge pull request #3461 from julient31/llg-correction
Correction of some LL features in the SPIN package
2022-09-26 14:56:36 -04:00
1eb3d50c22 simplify/modernize 2022-09-26 13:38:35 -04:00