Commit Graph

23208 Commits

Author SHA1 Message Date
c6bc21febf Merge pull request #2361 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2020-09-15 11:28:25 -04:00
2f3c73217b detect if dt has been changed from default and print warning if reset by units command 2020-09-15 10:50:44 -04:00
df9f0e244b add false positive 2020-09-14 17:18:14 -04:00
5634dd4394 correct formatting of examples 2020-09-14 17:15:53 -04:00
f70717710e fix for zstd support. add styles to list at top and document .zst extension requirement 2020-09-14 17:07:09 -04:00
50b80e078d Merge pull request #2354 from stanmoore1/qeq_refactor
small fix qeq/reax refactoring for base and accelerated variants
2020-09-14 12:18:32 -04:00
a5740d75cf add missing option 2020-09-14 09:27:49 -04:00
3655919c7c tweak minimize summary output format 2020-09-14 09:09:22 -04:00
b702298e83 fix typo 2020-09-12 19:06:58 -04:00
da0cdb0de4 update formatting of keyword summary 2020-09-12 19:06:30 -04:00
eda04dac98 update conventions and guidelines about C++ standard and requirements 2020-09-12 15:13:23 -04:00
69962b4de5 add test for MSM kspace without periodic boundaries 2020-09-12 11:10:38 -04:00
3368eb79d8 fix issue with local variable shadowing a global variable 2020-09-12 11:10:12 -04:00
d7500c3e5a MSM output format tweaks 2020-09-12 11:09:33 -04:00
16d2fef5ad add check that shrinkwrap boundaries are not use when reading a data file while a MSM kspace style is defined 2020-09-12 11:06:20 -04:00
4a8d6016e4 Update docs 2020-09-11 22:49:44 -06:00
bc1b876a3d make fix widom errors and test output consistent with the fix name capitalization 2020-09-11 19:29:17 -04:00
612f1d7ce3 fix typo 2020-09-11 17:49:06 -04:00
101d39142e Merge pull request #2357 from akohlmey/lib-get-mpi-comm
Add ability to retrieve the MPI communicator from LAMMPS instance via library/python interface
2020-09-11 11:20:12 -04:00
ded57ba749 move test to avoid issues with indentation from having tabs follow directly a list-table 2020-09-10 16:16:58 -04:00
4452109b60 address spelling issue 2020-09-10 16:15:03 -04:00
0d5f68bc30 make "new in" and "changed in" leads boldface 2020-09-10 16:14:53 -04:00
3d37fd05f4 disable caching - for now - to avoid bad side effects from sphinx-tabs 2020-09-10 16:14:18 -04:00
e813e2d30a add minimal unit test for lammps_get_mpi_comm() API 2020-09-09 22:12:47 -04:00
bd72ef7996 add API to library/python interface to extract the MPI communicator 2020-09-09 22:03:11 -04:00
cdd9d693ad Merge pull request #2349 from akohlmey/more-progguide-updates
More Programmer docs updates and related code refactoring
2020-09-09 14:34:41 -04:00
e238201be5 add a couple more versionadded directives 2020-09-09 13:21:19 -04:00
790b2693ba Merge pull request #2353 from junghans/cmake_clean_up
cmake: consistent usage of find variable
2020-09-09 11:04:13 -04:00
a51bebc9e4 Merge pull request #2340 from rbberger/container_update
Singularity Container definitions update
2020-09-09 09:53:48 -04:00
f4c4c62349 adjust test to updated API 2020-09-09 09:27:34 -04:00
03d43bda3c make "New in" and "Changed in" statements boldface to stand out more 2020-09-09 09:25:58 -04:00
2b854ec64f reformulate 2020-09-09 09:25:34 -04:00
a1cf6c087c no need to use a deprecated argument in a newly added API 2020-09-09 09:06:28 -04:00
2a42fe66ad discuss change to get LAMMPS handle as return value instead of argument 2020-09-09 09:06:00 -04:00
dad749b62b make vget()/vgot() inline functions again for optimal performance. 2020-09-08 20:52:51 -04:00
c818a00523 remove unwanted docs 2020-09-08 16:53:26 -04:00
ea0a9f00e8 swap order of classes in toctree 2020-09-08 16:45:16 -04:00
ca1b5ed936 fix minor issues 2020-09-08 16:43:10 -04:00
daf8a2313a split developer guide into multiple files 2020-09-08 16:38:06 -04:00
ee25ed3897 update/correct documentation for memory pool classes 2020-09-08 16:36:48 -04:00
9f4a991fc5 move over doxygen comments for a few LAMMPS classes 2020-09-08 16:36:29 -04:00
1273179d03 Fix compile error 2020-09-08 13:42:25 -06:00
9e47452382 recover compilation for platforms using malloc() instead of posix_memalign() 2020-09-08 15:36:21 -04:00
7a9d31328e remove obsolete comment 2020-09-08 15:29:42 -04:00
4f8e627479 QEq refactor 2020-09-08 13:16:45 -06:00
9f7e309f07 small updates to MyPage and convert MyPoolChunk similar to MyPage 2020-09-08 15:13:16 -04:00
a3cc7581b1 rename test for memory pools 2020-09-08 15:12:08 -04:00
f72e5b6d13 Typo 2020-09-08 12:52:32 -06:00
b008ba5ecb Merge remote-tracking branch 'origin/master' into cmake_clean_up 2020-09-08 12:51:49 -06:00
9f8b8529b1 Merge pull request #2348 from akohlmey/use-tabs-with-html
Enable sphinx-tabs extension with the html version of the documentation
2020-09-08 12:02:43 -04:00