Commit Graph

39918 Commits

Author SHA1 Message Date
2aacc017cb Changes to CMake to hopefully match Sachith's suggestions 2024-06-12 17:29:30 -06:00
ce7ba21b8b clarify potentially misleading comment 2024-06-12 17:02:25 -04:00
67d86b559e Clarifying BPM logic and removing spelling errors in doc 2024-06-12 14:44:13 -06:00
53db2af179 Adding ndata accessor to bond history 2024-06-12 12:27:34 -06:00
610172b9dc Merge branch 'lammps:develop' into cg-dna 2024-06-12 17:38:20 +01:00
2434ad6574 doc page 2024-06-12 17:29:16 +02:00
99263ed7d7 init_atomic with new pair name 2024-06-12 15:41:38 +02:00
2470d621c8 wrong header name... 2024-06-12 15:31:28 +02:00
3686a7fcf3 wrong cl / cubin header file names 2024-06-12 15:25:28 +02:00
84ed769ca3 changing the fix name and file names for coherence 2024-06-12 15:12:55 +02:00
7f1fbca66f update lal_base_dpd for optional charged 2024-06-12 14:30:54 +02:00
1a310f5729 Limit CoeffRest gran damping to non-cohesive, prevent potential nans 2024-06-11 17:03:15 -06:00
5ff853ce67 Merge branch 'develop' into small-patches 2024-06-11 16:56:28 -06:00
c190318649 Small doc page clarifications 2024-06-11 16:53:10 -06:00
7bb0da5255 Increased checks for broken bonds in bond BPM 2024-06-11 16:11:24 -06:00
2d9aad67d0 Consistent newton checks compute nbond/atom 2024-06-11 15:24:34 -06:00
e0228d1f15 Bond history compatability delete atoms 2024-06-11 13:16:34 -06:00
09bea938c5 fix copy-n-paste error 2024-06-10 14:26:32 -04:00
d61c94c0f3 move group2ndx and ndx2group to new EXTRA-COMMAND package. update docs. 2024-06-10 14:14:36 -04:00
567ba1f437 improve R value for SI units 2024-06-10 19:37:35 +02:00
77c04d3827 cosmetic changes 2024-06-10 09:15:14 -04:00
12b26eb0a5 Merge branch 'lammps:develop' into fix-plumed-cmake 2024-06-10 13:17:02 +01:00
fa8f73689e add /omp aliases to hybrid pair styles for consistency and added tests
without the aliases, the introspection check lead to skipping suitable tests
2024-06-10 07:33:17 -04:00
2a7f0fb863 update intel pair list support for molskip flag 2024-06-10 07:16:24 -04:00
5f85112102 fix hybrid sub-style detection for OPENMP package 2024-06-10 07:16:02 -04:00
1ec24db123 remove redundant and problem causing NP_INTRA flag 2024-06-10 06:46:22 -04:00
e0c2009525 update conditions, comments, better eflag handle 2024-06-10 11:33:58 +02:00
325350dce4 small tweaks 2024-06-09 12:03:40 -04:00
f442cb4f65 add unit tests for pair style hybrid/molecular 2024-06-09 11:44:35 -04:00
1f0cd8be2a fix neighbor list request bug 2024-06-09 11:40:34 -04:00
5fb1776fa1 add implementation of pair style hybrid/molecular 2024-06-09 10:31:37 -04:00
117786aa7b support molskip for r-RESPA neighbor lists 2024-06-09 10:31:16 -04:00
3f901f2d8e reset manybody_flag if threebody terms are turned on or off in sw pair style 2024-06-09 07:03:31 -04:00
91b9308d4f initial version of pair style hybrid/molecular 2024-06-09 07:02:18 -04:00
69a31b7da7 dependent python packages have caught up with changes in sphinx 7.3.7 2024-06-09 04:12:51 -04:00
5be5a53801 correct documentation for added bond hybrid/kk 2024-06-09 04:10:52 -04:00
43ce6b018a update Plumed support for version 2.8.4 and 2.9.1 2024-06-09 01:30:35 -04:00
ca8eb4fb68 update angle spica test 2024-06-08 21:57:24 -04:00
42b4ff4cc5 revert to develop test_angle_style, kokkos_omp test is in kokkos-unit-testing branch 2024-06-08 21:31:31 -04:00
85c345cf2d duplicate calc of r 2024-06-07 16:51:32 +02:00
f5b2eb3a80 Update lal_dpd_charged.cu 2024-06-07 15:16:54 +02:00
aadeb1149d double host write, wrong dpd cond 2024-06-07 15:14:05 +02:00
575047c278 Update fep.py 2024-06-07 14:40:21 +02:00
afc8c752fd wrong kernel params 2024-06-07 11:31:33 +02:00
14f0a14c82 Merge branch 'dpd_charged' of https://github.com/Eddy-Barraud/lammps-custom into dpd_charged 2024-06-07 09:05:13 +02:00
001063250e allocate extra_fields 2024-06-07 09:05:11 +02:00
203194c7fb Merge branch 'lammps:develop' into spica-kk 2024-06-06 14:13:32 -04:00
91c718c467 Update Install.sh 2024-06-06 12:47:11 -04:00
fd373957cc Merge branch 'lammps:develop' into dpd_charged 2024-06-06 18:37:40 +02:00
7cb73ca1a1 maybe wrong scale 2024-06-06 11:23:38 +02:00