Commit Graph

19906 Commits

Author SHA1 Message Date
cc2106397a fix ids once bug in compute chunk/atom 2023-03-22 10:18:50 -06:00
c9b383d3f0 grammar 2023-03-16 22:18:35 -04:00
4e221803b0 Merge branch 'develop' into collected-small-changes 2023-03-16 20:53:04 -04:00
7c0fdbe2d9 Merge pull request #3512 from jtclemm/gran-temp
Refactoring the GRANULAR package
2023-03-16 20:47:40 -04:00
ea20c934ea print warning when using fix efield with a TIP4P pair style 2023-03-16 18:33:23 -04:00
bf94448843 simplify and avoid segfault without pair style 2023-03-16 18:32:54 -04:00
5e6004961d Merge branch 'develop' into collected-small-changes 2023-03-16 18:00:36 -04:00
224b1369a1 Merge pull request #3685 from akohlmey/more-tip4p-support
Add TIP4P versions for compute dipole, compute dipole/chunk and fix efield
2023-03-16 17:59:58 -04:00
f1539d0ef5 silence compiler warnings 2023-03-16 17:53:58 -04:00
b41d826e0a Merge branch 'develop' into gran-temp 2023-03-16 17:44:36 -04:00
feb1b9e029 fix whitespace 2023-03-16 12:55:30 -04:00
180ed2553c Merge branch 'develop' into collected-small-changes 2023-03-16 12:54:48 -04:00
6069e8cb14 Merge pull request #3684 from jrgissing/encode_improper_symmetries
Encode improper symmetries
2023-03-16 12:33:15 -04:00
d71a78449a fix two bugs in the ndx2group command 2023-03-16 12:29:51 -04:00
a8c27a2275 clarify symmatoms convention 2023-03-15 23:55:13 -04:00
0bf0fd98cc explicitly specify central atom 2023-03-15 21:29:14 -04:00
56f4aaff47 explicitly specify central atom 2023-03-15 21:28:05 -04:00
fa9062a87e make Force::special_lj and Force::special_coul accessible through the library interface 2023-03-15 18:39:32 -04:00
88c8781396 silence compiler warnings 2023-03-14 10:17:20 -04:00
d2faf86214 Merge branch 'develop' into bond-harmonic-restrain 2023-03-14 00:41:28 -04:00
17f39d9d2c rename fix STORE/PERATOM to STORE/ATOM 2023-03-13 22:33:47 -04:00
ef67f790a2 whitespace 2023-03-13 19:43:44 -04:00
3ba37fc954 Merge branch 'develop' into bond-harmonic-restrain 2023-03-13 19:43:16 -04:00
c369c0252f fix issues with changes in fix STORE/PERATOM 2023-03-13 19:43:08 -04:00
92302d0f22 Merge branch 'develop' into mar2023_gpu_misc 2023-03-13 19:02:20 -04:00
3815c0ef76 modify fix STORE/PERATOM and callers to allow ghost comm 2023-03-13 17:00:54 -06:00
2d8936068e Merge pull request #3679 from ndtrung81/dielectric-bugfixes
Dielectric package doc update and bugfix
2023-03-13 18:27:50 -04:00
6bec23e7db Merge pull request #3668 from evoyiatzis/master
Implementation of analytical expressions for Born matrix
2023-03-13 17:19:05 -04:00
a8c1359c54 make energy handling consistent for variable field 2023-03-11 18:56:29 -05:00
91aae79fdc add docs for fix efield/tip4p 2023-03-11 18:13:44 -05:00
da9559d92c rewrite TIP4P molecule handling to process each force contribution only once 2023-03-11 18:13:44 -05:00
cf6f6829ae cosmetic 2023-03-11 18:13:44 -05:00
6b6f8087d3 output potential energy with fix efield with equal style variables 2023-03-11 18:13:44 -05:00
37b7ba7cae all functionality of fix efield/tip4p present (untested) 2023-03-11 18:13:44 -05:00
2de3f4d261 implementation for fix efield/tip4p for static field (untested) 2023-03-11 18:13:43 -05:00
b5804b320c update/improve/correct error messages in fix efield and make compatible with derived class 2023-03-11 18:13:36 -05:00
2a6515f765 use consistent names in error messages 2023-03-11 18:12:09 -05:00
02854c1d5c add compute dipole/tip4p and compute dipole/tip4p/chunk 2023-03-11 18:12:09 -05:00
416df96c1b add extract support for TIP4P parameters to cutoff versions 2023-03-11 18:12:09 -05:00
882df6ad23 typo 2023-03-09 22:08:03 -05:00
53056f47ed encode improper symmetries 2023-03-09 22:04:08 -05:00
d5f6c7e0be Implement born_matrix in pair_lj_cut_coul_cut.cpp 2023-03-09 10:06:04 +02:00
544a4e3d7f Include method declaration in pair_lj_cut_coul_cut.h 2023-03-09 10:03:57 +02:00
7da2f62bf6 Implement born_matrix in pair_nm_cut_coul_cut.cpp 2023-03-09 08:33:57 +02:00
0088607bc7 Include method declaration in pair_nm_cut_coul_cut.h 2023-03-09 08:31:44 +02:00
4b434c9a03 remove ifdefs 2023-03-08 18:40:29 -05:00
189be4625e improve/correct error messages for fix efield 2023-03-08 18:25:58 -05:00
fc8a048662 add unit test 2023-03-07 21:22:57 -05:00
9a8b5ebae0 use more unusual name for per-atom property 2023-03-07 20:36:28 -05:00
fd2cda66bb handle the case when the bond style is recreated after a restart 2023-03-07 20:18:41 -05:00