Commit Graph

15448 Commits

Author SHA1 Message Date
cddac395c6 some more cleanup 2021-08-28 07:52:14 -04:00
993826989c modernize fix ttm/mod implementation and align with fix ttm 2021-08-28 07:44:06 -04:00
1e37595055 pretty 2021-08-28 07:43:18 -04:00
da1fb924bb modernize code some more. avoid string pointer magic. 2021-08-28 05:43:39 -04:00
e6a45c1fa7 refactor grid data file reader. support descriptive comment(s) and metadata 2021-08-27 23:23:12 -04:00
6be84b72a8 simplify and plug memory leak with file output 2021-08-27 21:10:05 -04:00
9c2b96286f print GPU available info only when GPU package is included 2021-08-27 20:32:22 -04:00
28b6649f0c whitespace 2021-08-27 20:31:58 -04:00
cf33f0bb96 silence compiler warnings, remove dead code, and do some reformatting 2021-08-27 20:22:29 -04:00
a66f3dfbdd Merge branch 'master' into fix-ttm-grid 2021-08-27 19:56:42 -04:00
e93ae9ba12 apply clang-format 2021-08-27 19:56:33 -04:00
c513fc8784 update pppm/gpu to use the refactored GridComm class 2021-08-27 19:52:39 -04:00
4d1a6cbd73 Merge pull request #2904 from lammps/memory-null
force all memory methods to return nullptr if requested size <= 0
2021-08-27 16:59:04 -04:00
3e058b734b Merge pull request #2887 from jrgissing/bond-react-fixes
Bond react fixes
2021-08-27 16:58:33 -04:00
cc69431dd3 Merge pull request #2897 from dxhisboy/master
Correcting non-fdotr Virial tensor computation for interlayer potentials
2021-08-27 16:54:56 -04:00
a58e4fc876 whitespace 2021-08-27 14:59:26 -04:00
4eef3eaac6 Merge branch 'master' into collected-small-changes 2021-08-27 14:58:42 -04:00
e363b4aeff Merge pull request #2905 from weinbe2/fea-snap-large-system
Kokkos SNAP large system optimizations and cleanup
2021-08-27 14:23:37 -04:00
66da0ebada adjust INTEL pppm files for new GridComm interface 2021-08-27 11:01:27 -06:00
9658d1d983 Bump up the default chunksize in SNAP and update the docs 2021-08-27 12:34:19 -04:00
6ab951fedc only change functions known to break with zero-length 2021-08-27 10:28:40 -06:00
2387e12464 Merge pull request #2893 from lammps/doc-intro-updates
Update Intro section of LAMMPS Manual for stable release
2021-08-27 12:09:10 -04:00
0879484827 sync OPENMP package with new GridComm syntax 2021-08-27 09:48:35 -06:00
4089d7757d error->one to error->all corrections 2021-08-27 11:24:04 -04:00
89b4cc9498 Remove comment 2021-08-27 11:03:54 -04:00
27cabbf734 Add missing variable 2021-08-27 10:38:47 -04:00
1970ede534 Add user-settable threshold for extra parallelism 2021-08-27 10:22:10 -04:00
7ac2c0c66e refactor custom constraint
evaluates per-atom variables once, and correctly communicates values to ghosts
2021-08-26 23:00:15 -04:00
8c96f1a14b Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2021-08-26 22:56:08 -04:00
a686ce33c6 Added less-parallelism-higher-perf paths to recursive polynomial routines. Fixed qSNAP memory coalescing issue. Various modularity improvements. 2021-08-26 22:55:07 -04:00
bbb3f35aa3 "int64_t" is defined in stdint.h; must use "long" in OpenCL kernels instead 2021-08-26 22:46:08 -04:00
fc6b17b82a improve whitespace handling
previously, spaces inside of custom 'rxn' functions could cause issues
2021-08-26 22:28:44 -04:00
42a3a7d10f Merge branch 'master' into collected-small-changes
# Conflicts:
#	src/fix_property_atom.cpp
2021-08-26 21:14:23 -04:00
a519dc3e9a make DIELECTRIC package use of GridComm compatible with new version 2021-08-26 16:33:39 -06:00
21b017368b force all memory methods to return nullptr if requested size <= 0 2021-08-26 15:43:12 -06:00
ab8c9851b2 change style to styles to remove override of fix->style string 2021-08-26 15:20:52 -06:00
a85f125ee7 whitespace 2021-08-26 16:58:14 -04:00
892a18c3f6 Merge branch 'master' into fix-ttm-grid 2021-08-26 16:57:19 -04:00
6fea5dd316 avoid creating empty per atom position arrays for enforcing pbc for dumps 2021-08-26 16:16:30 -04:00
7b3e7d3d3a allow for command-line setting of initial temp 2021-08-26 11:52:07 -06:00
beffa0d1a1 remove old fix ttm 2021-08-26 10:19:56 -06:00
cbe27096b3 final tweaks 2021-08-26 10:19:22 -06:00
0fb03072b1 restart bug fix in new fix ttm/grid 2021-08-26 10:08:34 -06:00
0d8c58db02 synchronize DomainOMP::pbc() code with Domain::pbc() 2021-08-26 07:41:57 -04:00
a7f4bbffcf avoid segfault when trying to apply (strict) pbc or convert to/from fractional coordinates on an MPI rank without atoms 2021-08-26 07:10:47 -04:00
c7357d5731 Merge remote-tracking branch 'github/master' into collected-small-changes 2021-08-26 05:30:50 -04:00
6fcd4c0e30 Merge remote-tracking branch 'github/master' into doc-intro-updates 2021-08-26 05:29:53 -04:00
acf80f5c89 Merge branch 'master' into doc-intro-updates 2021-08-26 01:03:25 -04:00
a2d77593bb fix typo 2021-08-25 22:01:42 -04:00
a0dfae9876 more debugging of restarts 2021-08-25 16:28:40 -06:00