Commit Graph

307 Commits

Author SHA1 Message Date
a91d89b516 avoid array overflows and silence compiler warnings from unused parameters 2018-11-21 09:24:10 -05:00
9f960baa4f restore USER-ATM package data files taken from CVS repo 2018-11-20 09:17:02 -05:00
a7bfb30043 update atc/cauchy_born examples with missing files 2018-11-16 23:03:47 -05:00
e0955f6434 Merge branch 'master' into sdpd to resolve merge conflicts
# Conflicts:
#	cmake/CMakeLists.txt
#	src/Makefile
2018-11-08 16:32:02 -05:00
a6e9b99295 Merge pull request #1180 from gtribello/master
Add natively supported PLUMED interface to LAMMPS
2018-11-08 16:16:50 -05:00
a37d718ed1 update bond/react examples 2018-11-03 12:01:00 -06:00
badfdd7433 download only the plumed-src package and include further tweaks to be compatible with plumed 2.5b 2018-11-03 00:21:10 -04:00
ac11d66d5a provide reference logfiles and move generated files to reference folder 2018-11-02 23:28:09 -04:00
ba6f6f73f1 first commit: added SDPD 2018-10-30 17:40:00 +03:30
ff9f836be4 Merge remote-tracking branch 'upstream/master' 2018-10-26 22:01:05 +01:00
da84138475 correct scafacos input example 2018-10-19 15:31:53 -04:00
5a6226caa5 jive src headers with doc page entries and example scripts 2018-09-25 10:50:43 -06:00
44fcdc4024 update reference examples with versions that do not vary by MPI rank count 2018-09-06 21:20:47 -04:00
947f574503 Merge branch 'master' into compute_mop
# Conflicts:
#	cmake/CMakeLists.txt
2018-09-06 21:13:42 -04:00
0c92c22755 moved contents of USER-MOP package to USER-MISC as suggested by @sjplimp 2018-09-05 10:56:12 -04:00
d3d16882ca remove note for Rene 2018-09-05 08:12:19 -06:00
ff2e13e063 Merge branch 'master' into ScaFaCoS 2018-09-04 21:35:46 -04:00
cb4ffaf95c update docs and references for name changes in USER-MOP package, remove obsoleted files 2018-09-04 08:42:32 -04:00
a797a0d193 changed computes names to stress/mop and stress/mop/profile 2018-09-04 14:02:19 +02:00
f6f4b58167 add parallel reference output 2018-09-03 23:42:52 -04:00
7b423c6d4b integrate USER-MOP package into build and documentat system. apply latest LAMMPS programming style conventions 2018-09-03 23:37:25 -04:00
9e03bf7db9 make USER-DIFFRACTION input example fully consistent with output and remove additional input file 2018-09-01 19:12:46 -04:00
c23534019c fixed typo in example file name 2018-08-21 17:28:42 -06:00
e08aaa7e39 added examples for P3M with ScaFaCoS 2018-08-08 15:03:47 -06:00
2a5e550bda updated log files 2018-08-08 15:02:19 -06:00
7f5476b408 removed deprecated log files (will be replaced with more current ones) 2018-08-08 14:04:41 -06:00
cdde51d8af fixed example so that P3M also works, changed tolerance type in the FMM example 2018-08-07 14:29:04 -06:00
463e34cef5 Merge remote-tracking branch 'origin/master' into HEAD 2018-08-03 08:13:12 -06:00
c8be5a3f2d change ave/histo to ave/histo/weight 2018-08-01 11:11:18 +02:00
ae2d43031b added pressure output, to compare results with global virial (with internal PPPM) 2018-07-23 16:25:02 -06:00
a90e019ec7 updated ScaFaCoS examples, added open-boundary Hammersley distributed sphere and charged cloud near a charged wall examples 2018-07-23 16:13:15 -06:00
5c934cdb6f fixed examples to work with charged molecular restriction and new kspace call format 2018-07-20 10:40:29 -06:00
b0c9fde1dd more changes from Steve 2018-07-18 15:32:03 -06:00
c442166ded Tidied up example directory for PLUMED 2018-07-12 16:22:40 +01:00
6d9face1ec Added documentation describing PLUMED package installation 2018-07-12 12:26:09 +01:00
4d5635a3c4 Fixed virial contribution from PLUMED 2018-07-10 16:01:45 +01:00
7f5a83cb1d Added first go at checks on PLUMED interface to LAMMPS 2018-07-02 17:04:19 +01:00
b299bfa821 Started adding tests on PLUMED interface 2018-07-02 13:58:38 +01:00
2c5f2a6683 Added running example of PLUMED + LAMMPS
Not sure if this has been done correctly.  I add both the input and the output
2018-07-02 10:22:23 +01:00
9b44529591 Added an example 2018-06-29 17:46:51 +01:00
8e14143908 Merge pull request #925 from PabloPiaggi/pair_entropy
Pair entropy fingerprint
2018-06-26 13:16:09 -06:00
f36e1a2cdc Changed default deltabin from 2 to 3 2018-06-26 13:06:04 +02:00
9108306c11 Shorter entropy/atom example 2018-06-24 00:36:09 +02:00
86519ce213 Rename compute to entropy/atom 2018-06-24 00:25:07 +02:00
b2e6863d93 add reference log file. 2018-06-15 17:01:26 -04:00
e550f5120b Updated docs 2018-05-22 12:44:40 +02:00
124641dc8a Examples - new local option 2018-05-18 15:13:48 +02:00
a7c9418629 Merge pull request #890 from jrgissing/bond_react_final_touches
bond/react final touches
2018-05-07 10:37:47 -06:00
9d9d7cb9ed update example log files 2018-05-06 11:10:40 -04:00
916ed71760 fix bond/react final touches 2018-05-06 00:34:03 -06:00