Commit Graph

9141 Commits

Author SHA1 Message Date
d7892c8ea4 Update Errors_messages.rst 2022-09-07 00:02:31 -04:00
cfcd5a625d document type label support for Shake Bond Types 2022-09-06 23:27:03 -04:00
0dc3bccb95 clarify comment handling and parsing. document masses section. 2022-09-06 23:03:26 -04:00
b3c0253976 fix broken formatting 2022-09-06 23:02:59 -04:00
2331f6ddd4 correct label2type() function documentation 2022-09-06 22:03:27 -04:00
3a0b49b5bf Merge branch 'develop' into type-labels 2022-09-06 19:16:07 -04:00
1d986280ce rename variable special function to retrieve types for labels to label2type() 2022-09-06 18:56:00 -04:00
75e897b2fe new utility function "utils::expand_type" to convert type labels to numeric strings 2022-09-05 05:45:31 -04:00
e1960bbb9a streamline type label howto and remove discussions of not yet available features 2022-09-04 22:52:31 -04:00
fc738ea239 type offsets are only applied to numeric types 2022-09-04 22:12:59 -04:00
cad3cd7d8e fix a few typos with :doc: references 2022-09-04 17:27:32 -04:00
ad8a931fe4 revise/refacor Type Label section parsing and Atoms section parsing
- do not ignore numeric type in Type Label sections
- refuse invalid numeric types that will overflow arrays
- check for duplicate numeric type entries or non-unique labels
- better error messages
- use Tokenizer class instead of sscanf()
2022-09-04 01:01:36 -04:00
ca6222c12b implement utils::is_type() convenience function 2022-09-03 23:18:44 -04:00
7ecfb77e8d implement "labelmap write" command 2022-09-03 19:52:07 -04:00
8d9adeef16 clarify comments 2022-09-03 14:13:38 -04:00
fa1584cc17 add "labelmap clear" command, update docs 2022-09-03 12:38:07 -04:00
b60f144705 more formatting/typesetting consistency 2022-09-03 04:17:22 -04:00
724a7cb554 fix typo 2022-09-02 16:42:14 -04:00
6c8750c041 Merge branch 'develop' into collected-small-changes 2022-09-02 16:41:14 -04:00
b170ab056b properly link SPH and MACHDYN user guide PDFs from manual 2022-09-02 06:22:35 -04:00
9b41d28947 Merge branch 'develop' into type-labels
# Conflicts:
#	doc/src/dihedral_coeff.rst
2022-09-01 21:09:04 -04:00
566ea864b8 clarify dump_modify doc page meaning for every and every/time 2022-09-01 10:01:08 -06:00
4cff211a5e clarify dump doc page meaning Nevery = N 2022-09-01 09:53:57 -06:00
22f7255e1d Merge pull request #3421 from phankl/mesocnt_stable
Major update to mesocnt styles
2022-08-31 11:54:22 -04:00
0cc6ad8318 cosmetic. silence compiler warnings. remove dead code. 2022-08-31 11:25:35 -04:00
a288507934 corrected friction description 2022-08-31 15:37:30 +01:00
a85fbd83f4 mentioned interpolation range dependence of potential on delta1/2 values in doc 2022-08-31 15:11:01 +01:00
30191462f5 added change and add dates to doc 2022-08-31 12:33:22 +01:00
d874976222 Merge branch 'develop' into collected-small-changes 2022-08-30 14:59:07 -04:00
85965f01ce spelling 2022-08-30 14:44:01 -04:00
1139cb9345 formatted mesocnt doc files 2022-08-30 17:53:35 +01:00
8a058ec2a0 fixed whitespace 2022-08-30 15:14:34 +01:00
2c0eb10d62 label electron spin with "espin" instead of "spin" but be backward compatible 2022-08-30 06:20:53 -04:00
bfb15c6cc6 support setting electron spin and radius with the set command 2022-08-30 06:11:17 -04:00
978165377d clarify and correct units of "k" 2022-08-30 05:00:06 -04:00
118b464a53 add example for a 1-d pressure profile 2022-08-29 17:04:48 -04:00
d34f583ae6 Update doc/src/Packages_details.rst
Co-authored-by: Axel Kohlmeyer <akohlmey@gmail.com>
2022-08-29 22:04:09 +01:00
bdac6d3e05 Merge branch 'develop' into more-set-options 2022-08-29 12:21:17 -04:00
756a8fab18 Merge branch 'lammps:develop' into mesocnt_stable 2022-08-29 12:45:20 +01:00
74bbbb9e17 rename "set spin" to "set spin/atom" and "set spin/random" to "set spin/atom/random"
this also adds unit tests and improves error checking and messages
2022-08-28 19:24:32 -04:00
6e71318086 fix typo 2022-08-28 11:21:38 -04:00
69b32aef13 Merge remote-tracking branch 'github/develop' into collected-small-changes 2022-08-27 10:12:58 -04:00
4069aa3658 Fixed non-existent dump_custom attribute in dump_modify thresh example 2022-08-26 00:13:31 -05:00
6a3726425d update MEAM to state of latest PR #3412 2022-08-23 14:20:45 -04:00
60e5ce0dc2 refer to temperature more consistently with :math:T instead of *T* 2022-08-23 05:26:07 -04:00
0b22ad5189 correctly use versionchanged directive 2022-08-23 01:04:49 -04:00
54c928dbce improve typesetting, record version change, a few more k_B changes 2022-08-23 00:51:36 -04:00
007f7fbbfb Fixed kT vs k_B T in a couple of places and associated description 2022-08-22 23:46:49 -05:00
0f3c4357c8 Merge branch 'doc-fixes' of github.com:hammondkd/lammps into doc-fixes
Changed some "dof" to "DOF" as per Axel's preference
2022-08-22 23:29:34 -05:00
5d04e88e28 Changed a couple of "dof" to "DOF" as per Axel's preference 2022-08-22 23:29:24 -05:00