Commit Graph

27390 Commits

Author SHA1 Message Date
db4fcd7537 update package dependency 2021-07-30 15:24:23 -04:00
82936b1e4f fixing indexing bug
The gyration_tensor[4] element  as computed by "compute gyration" corresponds to the xz component of the gyration tensor and the gyration_tensor[5] to the yz component. The  code  assumed that gyration_tensor[4] corresponds to the yz component and the gyration_tensor[5] to the xz.
2021-07-30 18:14:44 +02:00
f5b82ea3ef Merge pull request #2856 from akohlmey/collected-small-changes
Collected small changes and fixes
2021-07-30 11:36:40 -04:00
d211bbc0d6 expand ArgInfo class unit tests 2021-07-29 20:58:02 -04:00
cb32bb972b fix bugs in ArgInfo class 2021-07-29 20:57:42 -04:00
6b20da7549 update lammps shell test to use a fix that is always available 2021-07-29 17:48:35 -04:00
5cdf55937d move pair style tracker to a better location 2021-07-29 17:17:06 -04:00
ca2abd22be remove unused file 2021-07-29 17:08:16 -04:00
a80829bd79 avoid compilation error 2021-07-29 16:14:52 -04:00
a6d66c3518 update .gitignore 2021-07-29 16:07:23 -04:00
33905fd689 fix one more KOKKOS package installation dependency 2021-07-29 16:07:14 -04:00
246b70ae46 update codeowners list 2021-07-29 15:56:21 -04:00
211d6636b4 modernize and simplify code to find best matching restart file 2021-07-29 12:09:55 -04:00
5f2b947b99 fix typo 2021-07-29 11:48:24 -04:00
1e48be92aa avoid segfault 2021-07-28 21:50:20 -04:00
b9ab0eb607 fix broken symbolic links 2021-07-28 21:32:52 -04:00
bf6c982b49 skip using neighbor list load balancing weight when using KOKKOS with GPU 2021-07-28 21:30:06 -04:00
b8d3297659 add missing package dependency 2021-07-28 18:45:09 -04:00
d33863839e update pair style installation dependencies 2021-07-28 18:37:59 -04:00
294ac76f41 forgot to move pair style beck to EXTRA-PAIR 2021-07-28 18:33:33 -04:00
6fcfbb7793 add missing dependency for conventional build 2021-07-28 18:18:54 -04:00
3a5d3fc541 fix compilation 2021-07-28 18:11:59 -04:00
218467b385 use fabs() instead of abs() on floating point number 2021-07-28 16:17:12 -04:00
9a4bc8eda1 apply citation reminder 2021-07-28 16:16:54 -04:00
f46e1c98f7 removed dead code and make consistent with non-OPENMP version 2021-07-28 16:16:42 -04:00
32be894ae2 silence compiler warnings 2021-07-28 16:16:22 -04:00
b59f23068f Merge pull request #2851 from akohlmey/next_patch_release
Step version number strings for the next patch release
patch_28Jul2021
2021-07-28 15:26:03 -04:00
b2f70f4e1f Merge pull request #2855 from akohlmey/update-unittest
Correct a couple of unit tests for package reorganization
2021-07-28 14:15:01 -04:00
600471d07f skip run test with fix when fix is not available 2021-07-28 12:11:54 -04:00
74a27c102e correct prerequisite 2021-07-28 12:11:35 -04:00
ed34856961 Merge pull request #2854 from akohlmey/final-fixes-for-patch-release
Final fixes for the patch release
2021-07-27 20:31:52 -04:00
8e6b7bf6e5 Merge pull request #2853 from stanmoore1/kk_verlet
Fix bug in verlet_kokkos.cpp with GRANULAR package
2021-07-27 18:59:20 -04:00
bb5da016d4 add dependencies for KOKKOS style to the conventional build 2021-07-27 18:21:45 -04:00
269690b771 document hard package dependencies 2021-07-27 18:21:22 -04:00
fe34fe26b2 add a hard dependency on EXTRA-PAIR to the DIELECTRIC package 2021-07-27 18:21:08 -04:00
416048e939 Fix compile error 2021-07-27 15:57:06 -06:00
f20479f10e Fix typo 2021-07-27 15:47:42 -06:00
e47bd5c490 Merge branch 'master' of github.com:lammps/lammps into kk_verlet 2021-07-27 14:28:54 -06:00
c4eee478b1 move back to src for dependencies 2021-07-27 15:53:35 -04:00
de4322b54c whitespace fixes 2021-07-27 14:32:04 -04:00
3ff096e517 Merge pull request #2848 from akohlmey/collected-small-changes
Collected small changes for the next patch release
2021-07-27 14:24:12 -04:00
b1331f52a5 Merge pull request #2849 from wmbrownIntel/intel-omp-simd
Convert Intel package simd vectorization directives to OpenMP standard
2021-07-27 13:37:58 -04:00
dbe14d9ee7 Add missing method to Kokkos verlet 2021-07-27 11:22:20 -06:00
d292da78ca address CodeQL warnings and reformat with clang-format 2021-07-27 12:29:44 -04:00
f7f85822a9 move some more computes from EXTRA-COMPUTE back to src because of dependencies 2021-07-27 12:07:27 -04:00
8838fbc1c3 Merge pull request #2850 from akohlmey/lammps-gather-bonds
Implement lammps_gather_bonds() into the C-library interface and the Python module
2021-07-27 11:30:19 -04:00
ec069595f7 move compute orientorder/atom because compute coord/atom depends on it 2021-07-27 11:16:40 -04:00
2d488bab6b Merge branch 'master' into collected-small-changes 2021-07-27 11:15:00 -04:00
dab884fd1f Merge pull request #2829 from akohlmey/package-reorganization2
Package reorganization (step 2)
2021-07-27 10:55:32 -04:00
f39c5178d8 update plumed to version 2.7.2 and drop workaround for 2.7.1 2021-07-27 09:56:52 -04:00