Commit Graph

9534 Commits

Author SHA1 Message Date
bcef43c7d1 add code to check the ABI version of the LATTE library 2018-02-21 12:11:02 -05:00
aa1503b7e0 Merge pull request #800 from athomps/fix_gcmc_segfault_fix
Added warning to discourage use of group all and fixed some segfault …
2018-02-21 09:50:22 -07:00
d9d072df65 Merge pull request #809 from Jc11235/fix_neb_old_tangent_implementation
added old tangent to fix_neb for AGNI potential
2018-02-21 09:49:39 -07:00
a3cd600052 Merge pull request #786 from jrgissing/per_atom_prop_group
per-atom property dynamic group
2018-02-21 09:48:49 -07:00
5191071581 no need to cast fixes to specific styles/types 2018-02-21 11:15:44 +01:00
b6821ed942 since the code uses static ids, only one instance is allowed at a time 2018-02-21 11:15:09 +01:00
deeba53a24 consolidate inclusion file style with LAMMPS conventions 2018-02-21 11:14:32 +01:00
b252866393 sync fix temp/rescale to upstream 2018-02-21 10:17:00 +01:00
a672874186 Update comment
Clarify the comment as to why this else branch was added and what this represents.
2018-02-21 10:04:13 +01:00
911529ab24 correct typo 2018-02-21 08:43:33 +01:00
a5a47899a3 make XDR support for dump style xtc compile on MacOSX 2018-02-20 22:10:21 +01:00
c399b75dec 2nd try on LATTE error returns, plus a couple minor doc edits 2018-02-20 12:52:12 -07:00
9cf99ef479 Merge pull request #806 from vishalkenchan/new_pair_lj_cut_coul_wolf
Lennard-Jones with Coulomb interactions accounted through Wolf sum
2018-02-20 11:55:37 -07:00
9f7b837f34 replace non-ASCII character 2018-02-20 17:18:56 +01:00
a8a38216ae added old tangent to fix_neb for AGNI potential 2018-02-20 10:06:24 -05:00
d52c5435a7 ignore installed copy of fix bond/react 2018-02-18 17:12:03 +01:00
75a432833b remove messy hack 2018-02-18 17:11:06 +01:00
5843be1557 move fix bond/react to USER-MISC package 2018-02-18 17:03:40 +01:00
7ec4a5818d add USER-OMP versions of lj/cut/coul/wolf 2018-02-18 16:38:50 +01:00
44285f818f more cleanup and respa code removal 2018-02-18 16:37:41 +01:00
98bcf51a45 there is no support for multi-cutoff r-RESPA in lj/cut/coul/wolf 2018-02-18 16:07:00 +01:00
c864e55adb Lennard-Jones potential with Coulomb interactions accounted through Wolf summations 2018-02-18 14:20:59 +01:00
c4ea2f2b34 update long-range coulomb message formatting, so it fits better into other kspace output 2018-02-16 14:24:33 +01:00
a641e40e79 use Error::message() instead of Error::warning() to report whether coulomb tables are used or not 2018-02-16 14:11:58 +01:00
3d12cff8a5 Merge branch 'patch-1' of https://github.com/evoyiatzis/lammps into collected-small-changes 2018-02-16 10:55:25 +01:00
2c4287630d allow dynamics groups for fix nve/limit and fix temp/rescale 2018-02-15 05:17:15 -05:00
f8daea5f3e make dihedrals and impropers header output consistent with bonds and angles 2018-02-15 05:13:59 -05:00
4210abfc79 bugifx for using compute chunk/atom with compress via rerun or right at the beginning of a run 2018-02-13 18:15:17 +01:00
1a213363f1 add group style to create an empty group directly 2018-02-13 14:54:30 +01:00
fcf552ffe1 Merge branch 'patch-4' of https://github.com/abbatux/lammps into collected-small-changes 2018-02-13 09:51:02 +01:00
378c5071bf protect library interface from issuing lammps commands during run and minimize 2018-02-12 14:26:05 -05:00
f10c988903 Merge branch 'master' into reax_dup 2018-02-12 08:59:57 -07:00
b9eaf98702 avoid uninitialized memory access errors reports from valgrind with fix qeq 2018-02-11 17:09:06 +01:00
afd39eb9b8 correctly represent, that the molecule summary refers to the largest type number and not the number of types 2018-02-11 16:17:24 +01:00
6efeab0f3a avoid segfault when using a hash as map on an empty system 2018-02-10 20:40:02 +01:00
7e78738c73 patch 5Feb18 2018-02-09 14:26:21 -07:00
8a39ae8585 remove dead code 2018-02-09 17:32:42 +01:00
3528f9ca27 fix bugs in documentation and implementation of atom style mdpd 2018-02-09 15:19:01 +01:00
2e99e54e23 Merge branch 'patch-2' of https://github.com/amilumas/lammps into collected-small-changes 2018-02-09 14:44:11 +01:00
a0de2f27a5 avoid segfaults in USER-MESO by checking for required atom style flags 2018-02-08 19:15:09 +01:00
21fe88ffa8 remove dead code in various neighbor list related source files 2018-02-08 13:07:56 -05:00
996c62f4e0 fix bond/react: generalized classical chemical reactions 2018-02-07 21:58:05 -07:00
b49806d36a correct the logic for checking if fix is right
previously had incorrect logic for checking if fix is acceptable
2018-02-07 16:35:49 -05:00
669ae02a85 apply pattern to ignore OPT package sources 2018-02-06 16:57:27 +01:00
1d403b2aa3 Added warning to discourage use of group all and fixed some segfault cases 2018-02-05 13:29:14 -07:00
fa4c7fc664 Merge pull request #781 from wmbrownIntel/user-intel-2018u1p2
USER-INTEL: Adding missing backslash for two Makefiles using Intel co…
2018-02-02 14:51:23 -07:00
401bfc52e1 Merge pull request #798 from akohlmey/always-use-internal-xdr
Replace OS provided XDR support with bundled code
2018-02-02 14:47:40 -07:00
984fda5e78 Merge pull request #797 from akohlmey/multifile-restart-bugfix
Address bug in multifile restart writing with step number included
2018-02-02 14:47:09 -07:00
196b3c81ef Merge pull request #796 from akohlmey/create-bonds-sanity-check
Sanity check on created/read-in bonds/angles/dihedrals/impropers
2018-02-02 14:46:46 -07:00
f4a79b4d8e Merge pull request #794 from akohlmey/tersoff-fixes
Consistent checking of Tersoff potential parameters
2018-02-02 14:46:11 -07:00