Commit Graph

272 Commits

Author SHA1 Message Date
dbc55a403f overhaul of fix ipi to be more consistent with LAMMPS programming conventions 2014-08-12 11:33:59 -04:00
e2352387fb some clarification of domain socket name. ifdef out include files on windows 2014-08-11 18:09:17 -04:00
76a61445d8 add fix ipi for path integrals via python frontend 2014-08-11 16:07:31 -04:00
2d5428bee0 minor corrections to GLE code from michele ceriotti 2014-08-11 15:51:53 -04:00
4a197537c0 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
2014-08-07 08:24:10 -04:00
ad4d9d88b8 include optimized matrix-matrix multiplication 2014-08-06 18:59:47 -04:00
ce4bea7aac replace unsigned long with int and simplify C reinit. 2014-08-06 13:18:49 -04:00
2cca373515 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12253 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-08-06 16:07:54 +00:00
57b8a339eb clean up reading of C matrix and fix missing scaling bug 2014-08-05 01:51:31 -04:00
8821eb0518 cleaned up code some. doesn't seem to fully work yet. 2014-08-05 01:14:23 -04:00
2056624858 remove trailing whitespace 2014-08-04 22:23:31 -04:00
5e98c4a3e6 some simple cleanup and correction to C++ style and syntax 2014-08-04 22:21:41 -04:00
ff39614926 import updated GLE fix from michele ceriotti 2014-08-04 22:17:04 -04:00
29ae4bd8dc Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	lib/cuda/Makefile.lammps
	lib/gpu/lal_coul_long.cu
	src/VORONOI/compute_voronoi_atom.cpp
	src/version.h
2014-07-01 12:08:09 -04:00
026ff1f6dd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@12144 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-06-27 17:22:32 +00:00
4acacd8e3b Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	src/MISC/fix_efield.cpp
	src/fix_addforce.cpp
	src/fix_move.cpp
	src/fix_setforce.cpp
2014-05-08 08:49:17 -04:00
53db68362e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11935 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-05-07 14:30:27 +00:00
8bee4ef596 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11907 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-05-02 21:49:36 +00:00
0fbda306f9 next batch of code cleanup based on compiler warnings 2014-04-30 08:08:30 -04:00
f461504c93 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11829 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-04-18 15:25:28 +00:00
9374001aad next batch of unused variable removal 2014-04-16 16:36:59 -04:00
492e027896 some more cleanups based on warnings from newer gcc 2014-04-16 15:53:44 -04:00
1fac1d41fa git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11789 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-04-15 15:24:27 +00:00
d7bbb795ff spelling fix 2014-04-12 12:44:58 -04:00
323e3075c4 remove even more unused variables and have consistent initialization 2014-04-12 18:39:01 +02:00
0916861315 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11777 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-04-11 14:46:49 +00:00
5fcfc9f575 various little cleanups to silence compiler warnings
clarify/simplify some code and initialize variables where needed.
also remove dead code and unused class members
2014-04-10 18:21:12 +02:00
eabcf5cd7d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11732 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-04-07 21:10:33 +00:00
9ca0fa9029 make pair style tersoff/table/omp thread safe 2014-04-05 17:13:23 -04:00
0de9e4252b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11701 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-04-04 16:40:17 +00:00
573db9e2f7 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.html
	doc/Manual.txt
	doc/fix_oneway.txt
	doc/fix_temp_csvr.txt
	src/fix_move.cpp
	src/fix_nh.cpp
	src/fix_temp_csvr.cpp
	src/neigh_stencil.cpp
	src/pair.cpp
	src/pair_hybrid.cpp
	src/read_data.cpp
	tools/msi2lmp/src/msi2lmp.c
	tools/msi2lmp/src/msi2lmp.h

Signed-off-by: Axel Kohlmeyer <akohlmey@gmail.com>
2014-03-12 17:43:22 -04:00
61af282654 move open_potential() from pair.cpp to force.cpp and extend to bonds/angles 2014-02-14 14:17:15 -05:00
1a8ee73f0a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11561 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-02-13 15:55:28 +00:00
7b433cf7a2 add a few more cases that should recognize $LAMMPS_POTENTIALS 2014-02-11 22:07:40 -05:00
10fb1ebded git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11420 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-31 22:48:28 +00:00
2a59bed5aa cosmetic changes 2014-01-31 16:58:25 -05:00
1ba04dabf6 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11393 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-30 18:30:18 +00:00
f709b5d63a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11283 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-21 15:43:45 +00:00
04dc30ab86 adapt fix imd so it compiles with -DLAMMPS_BIGBIG 2014-01-20 18:34:26 -05:00
46e8e6c120 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/MAKE/Makefile.openmpi
	src/MANYBODY/fix_qeq_comb.cpp
	src/MANYBODY/pair_nb3b_harmonic.cpp
	src/RIGID/fix_rigid_small.cpp
	src/RIGID/fix_shake.cpp
	src/USER-REAXC/fix_qeq_reax.cpp
	src/USER-REAXC/fix_reaxc_bonds.cpp
	src/read_data.cpp
	src/special.h
2014-01-18 11:52:59 -05:00
cb1ad361fb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11256 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-17 21:17:42 +00:00
bad19033d0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11250 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-17 18:43:09 +00:00
a6ca3cab54 Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	src/RIGID/fix_rigid_small.cpp
2014-01-16 20:53:36 -05:00
a1ef01fc1a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11243 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2014-01-14 16:17:20 +00:00
968623d245 add fix that allows only one direction of velocities in a given region. 2014-01-10 15:17:42 -05:00
5b0c62a2a0 Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/USER-MISC/bond_harmonic_shift.cpp
	src/USER-MISC/bond_harmonic_shift_cut.cpp
2013-11-26 13:39:09 +01:00
8fb13f4671 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11055 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-11-25 16:04:01 +00:00
1f844fd910 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11054 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-11-25 16:02:48 +00:00
6822a592c8 fix bug in write_data 2013-11-24 17:32:55 +01:00
356e222654 bufixes for angle style quartic 2013-11-23 22:55:26 +01:00