Commit Graph

1640 Commits

Author SHA1 Message Date
550048f458 Merge branch 'develop' into molecule-refactor-for-json 2025-06-12 21:21:38 -04:00
f9de296ed1 make "coords" optional and infer natoms from "types" instead 2025-06-12 21:19:32 -04:00
4097733b52 small tweaks 2025-06-12 11:19:42 -04:00
dd30b5a258 add tool to regularize/reformat/reindent JSON files 2025-06-12 11:19:16 -04:00
766ef241d9 update date 2025-06-12 07:48:31 -04:00
b0694e4e73 add support for dipoles section 2025-06-11 18:09:40 -04:00
3d7f7af8c7 parse charges, diameters, and masses 2025-06-11 17:54:41 -04:00
e7cf0701a8 add support for molecule and fragments sections 2025-06-11 16:45:40 -04:00
df08818fef refactor handling of plugin loading to make plugin a global property 2025-06-11 02:52:28 -04:00
acf8a51b01 Merge branch 'develop' into molecule-refactor-for-json 2025-06-04 19:42:03 -04:00
ddb6bb2cfb adjust to include new build of gcc/musl cross-compiler 2025-06-04 09:57:14 -04:00
04c642905f make "format" and "data" required object sections 2025-05-31 22:28:54 -04:00
f5cc752648 update magic file and point to origin 2025-05-28 23:18:16 -04:00
1d8d8b6445 add title and version info to JSON schema file 2025-05-23 23:31:14 -04:00
018342afc8 update schema with stricter checks. no need to bond-ids, angle-ids etc. 2025-05-23 23:00:50 -04:00
0975207ba4 Add more fields to molecule schema
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
2025-05-23 22:01:31 -04:00
534373bef3 flag required properties 2025-05-23 22:00:05 -04:00
f979d503d9 fix minor issues 2025-05-23 21:59:33 -04:00
30b555d7dc add units keyword 2025-05-22 23:23:22 -04:00
0df77ef7ca start a tools/json folder with molecule schema and README 2025-05-22 21:42:33 -04:00
6800e8bb39 step LAMMPS-GUI version number 2025-05-21 08:01:28 -04:00
f9ba063c4a add citation reminder 2025-04-30 12:17:31 -04:00
2fc7d287d4 Merge branch 'develop' into collected-small-fixes 2025-04-28 22:27:32 -04:00
c886fff624 Merge branch 'develop' into gcmc-eatom 2025-04-28 17:55:48 -06:00
e5854ced41 backward compatibility not needed here 2025-04-28 18:56:32 -04:00
0768aac1fd update Qt platform version for flatpak build to latest 5.15 branch 2025-04-28 18:45:57 -04:00
75d3d79fca open available error URLs with double click or from context menu 2025-04-28 18:25:40 -04:00
db3d93210d highlight error URLs in logwindow 2025-04-28 10:56:37 -04:00
31b18ad24e update help index table 2025-04-27 10:03:35 -04:00
092df8ed8f add copyright header 2025-04-26 00:56:47 -04:00
4897fbb210 Merge branch 'develop' into collected-small-fixes 2025-04-26 00:50:58 -04:00
40d8e1b95f Merge pull request #4535 from Bibobu/plot_forces_tool
Adding python tool to plot tabulated forces
2025-04-26 00:50:32 -04:00
d406289a7a propagate changes from library.cpp/library.h to swig and plugin interface 2025-04-25 17:04:32 -04:00
d5c4f9c158 Fixed whitespace 2025-04-20 11:01:38 -06:00
0bab80a26e not much use for editing x axis label. better give more space to other options 2025-04-13 19:33:07 -04:00
f181ca6aec support setting graph colors in preferences 2025-04-13 16:56:21 -04:00
bb09088731 add new tab to preferences for charts window settings 2025-04-12 11:49:41 -04:00
1ad2df84d8 add checkbox to automatically open tutorial website, if available 2025-04-12 06:49:44 -04:00
d0c3564216 update TODO list 2025-04-12 00:53:45 -04:00
ed1f4cc381 add functionality to edit the plot title and x- and y-axis labels 2025-04-11 23:25:56 -04:00
90797c7b62 document that also molecules from the molecule command can be visualized 2025-04-10 11:51:13 -04:00
dfc10e5b59 small improvements of molecule visualization. 2025-04-10 08:56:57 -04:00
bc031bdd7a initial attempt to allow viewing molecules. 2025-04-10 08:23:04 -04:00
32592e6660 add feature idea for LAMMPS-GUI 2025-04-10 01:13:44 -04:00
7034e930fd update date 2025-04-06 15:03:39 -04:00
cf3ffb9dfc simplify fingerprint to match more suppression cases 2025-04-06 10:25:31 -04:00
6ab7d7d818 Made plot_forces executable 2025-04-06 10:37:54 +02:00
94e6022210 Changed --recompute option of plot_forces to -d for consistency 2025-04-06 10:34:28 +02:00
b357540e92 Added plot_forces description to README.md 2025-04-06 10:33:30 +02:00
f8757abe92 Moved plot_forces to the tools/tabulate/ folder 2025-04-06 10:31:29 +02:00