Commit Graph

50 Commits

Author SHA1 Message Date
60e58c44cf Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
2013-07-26 13:15:49 +02:00
856f78e50a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10349 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-07-25 17:47:47 +00:00
f37ae6cb74 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10161 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-06-28 19:06:37 +00:00
2b1e3a30bd Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	doc/fix_tune_kspace.txt
	doc/group2ndx.txt
	src/DIPOLE/atom_vec_dipole.cpp
	src/DIPOLE/pair_lj_long_dipole_long.cpp
	src/MOLECULE/atom_vec_angle.cpp
	src/MOLECULE/atom_vec_bond.cpp
	src/MOLECULE/atom_vec_full.cpp
	src/MOLECULE/atom_vec_molecular.cpp
	src/PERI/atom_vec_peri.cpp
	src/USER-AWPMD/atom_vec_wavepacket.cpp
	src/USER-COLVARS/README
	src/USER-EFF/atom_vec_electron.cpp
	src/USER-SPH/atom_vec_meso.cpp
	src/atom.h
	src/atom_vec_atomic.cpp
	src/atom_vec_body.cpp
	src/atom_vec_charge.cpp
	src/atom_vec_ellipsoid.cpp
	src/atom_vec_line.cpp
	src/atom_vec_sphere.cpp
	src/atom_vec_tri.cpp
	src/fix_restrain.cpp
	src/force.cpp
	tools/restart2data.cpp
2013-06-28 13:09:52 +02:00
8d699db7a8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10113 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-06-27 21:41:33 +00:00
2dbe3f80a2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10103 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-06-27 20:02:55 +00:00
2e5f2ba1e8 port AWPMD to cross compilation with mingw 2013-06-25 00:31:43 +02:00
0e04550043 massive patch to flag non-numeric input 2013-06-23 14:34:38 +02:00
ad9e26e107 make sure communication buffers for atom data are fully initialized. 2013-06-05 18:01:27 +02:00
88d49ad3e9 more meaningful error location for numerical parsing checks 2013-06-04 09:57:10 +02:00
ce2b853e4a Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Eqs/pair_gauss.jpg
	doc/Manual.txt
	doc/pair_list.html
	doc/pair_list.txt
	lib/atc/Makefile.lammps.linalg
	lib/awpmd/Makefile.lammps.linalg
	lib/gpu/Makefile.lincoln
	lib/linalg/Makefile.gfortran
	lib/linalg/Makefile.mingw_cross
	lib/linalg/README
	lib/reax/Makefile.lammps
	src/USER-CG-CMM/Install.sh
	src/USER-COLVARS/Install.sh
	src/USER-CUDA/Install.sh
	src/USER-MISC/Install.sh
	src/USER-MISC/pair_list.cpp
	src/USER-OMP/Install.sh
	src/USER-PHONON/Install.sh
2013-06-01 13:53:34 +02:00
a5da3aa1ce git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9987 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-05-31 15:17:46 +00:00
97ff0b349c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9946 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-05-30 16:42:54 +00:00
c1b6654dbc Merge remote-tracking branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/MOLECULE/atom_vec_full.cpp
	src/REPLICA/prd.cpp
	src/atom_vec_charge.cpp
2013-05-10 10:03:21 +02:00
07071dccd9 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9837 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-05-08 15:59:33 +00:00
81a2ac57dc Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
2013-04-04 17:20:27 +02:00
da77d5e62a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9737 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-04-03 16:52:29 +00:00
558c801d92 allocate storage for one more atom, so we can have a dummy atom in neighbor lists 2013-02-18 20:38:37 +01:00
1d68769ded Merge branch 'master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/KSPACE/pair_buck_long_coul_long.cpp
	src/USER-OMP/angle_fourier_omp.cpp
	src/USER-OMP/angle_fourier_simple_omp.cpp
	src/USER-OMP/angle_quartic_omp.cpp
	src/USER-OMP/dihedral_fourier_omp.cpp
	src/USER-OMP/dihedral_nharmonic_omp.cpp
	src/USER-OMP/dihedral_quadratic_omp.cpp
	src/USER-OMP/domain_omp.cpp
	src/USER-OMP/fix_nh_asphere_omp.cpp
	src/USER-OMP/fix_nh_omp.cpp
	src/USER-OMP/fix_nh_sphere_omp.cpp
	src/USER-OMP/fix_nve_omp.cpp
	src/USER-OMP/fix_nvt_sllod_omp.cpp
	src/USER-OMP/pair_dipole_sf_omp.cpp
	src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
	src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
	src/math_special.h
	src/neigh_bond.cpp
	src/neighbor.h
2013-02-09 13:21:53 +01:00
ce7dede594 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9399 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-02-08 16:44:04 +00:00
bdd81705cc Merge branch 'master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
2013-02-01 08:29:23 -05:00
0c6b84987c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9346 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-01-31 16:31:03 +00:00
f73d1bffe2 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/pair_lj_cut_coul_cut.h
2012-07-26 07:28:59 -04:00
47552d4033 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8498 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-07-25 15:16:20 +00:00
2a099bfedb Merge branch 'master' into lammps-icms
Resolve Conflicts:
	src/region.cpp
2012-06-30 11:23:32 -04:00
6795f0f3af git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8432 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-29 17:16:11 +00:00
66c5617afb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8395 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-25 22:03:31 +00:00
6e511540f8 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/REPLICA/prd.cpp
2012-06-22 10:09:35 -04:00
4baf5cec99 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8360 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-20 18:06:29 +00:00
dc9431dcb2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8343 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-19 20:44:29 +00:00
7b55b61abb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8342 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-19 20:33:12 +00:00
48aa45f7f0 Merge branch 'master' into lammps-icms
Resolved Conflicts (i hope):
	src/REPLICA/neb.cpp
	src/REPLICA/prd.cpp
	src/REPLICA/tad.cpp
	src/REPLICA/verlet_split.cpp
	src/USER-CUDA/atom_vec_angle_cuda.h
	src/USER-CUDA/atom_vec_atomic_cuda.h
	src/USER-CUDA/atom_vec_charge_cuda.h
	src/USER-CUDA/atom_vec_full_cuda.h
	src/USER-CUDA/compute_pe_cuda.h
	src/USER-CUDA/compute_pressure_cuda.h
	src/USER-CUDA/compute_temp_cuda.h
	src/USER-CUDA/compute_temp_partial_cuda.h
	src/USER-CUDA/cuda.cpp
	src/USER-CUDA/cuda.h
	src/USER-CUDA/cuda_data.h
	src/USER-CUDA/cuda_neigh_list.h
	src/USER-CUDA/fft3d_cuda.h
	src/USER-CUDA/fft3d_wrap_cuda.h
	src/USER-CUDA/fix_addforce_cuda.h
	src/USER-CUDA/fix_aveforce_cuda.h
	src/USER-CUDA/fix_enforce2d_cuda.h
	src/USER-CUDA/fix_freeze_cuda.h
	src/USER-CUDA/fix_gravity_cuda.h
	src/USER-CUDA/fix_nve_cuda.h
	src/USER-CUDA/fix_set_force_cuda.h
	src/USER-CUDA/fix_temp_berendsen_cuda.h
	src/USER-CUDA/fix_temp_rescale_cuda.h
	src/USER-CUDA/fix_temp_rescale_limit_cuda.h
	src/USER-CUDA/fix_viscous_cuda.h
	src/USER-CUDA/pair_born_coul_long_cuda.h
	src/USER-CUDA/pair_buck_coul_cut_cuda.h
	src/USER-CUDA/pair_buck_coul_long_cuda.h
	src/USER-CUDA/pair_buck_cuda.h
	src/USER-CUDA/pair_cg_cmm_coul_cut_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_coul_cut_cuda.h
	src/USER-CUDA/pair_cg_cmm_coul_debye_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_coul_debye_cuda.h
	src/USER-CUDA/pair_cg_cmm_coul_long_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_coul_long_cuda.h
	src/USER-CUDA/pair_cg_cmm_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_cuda.h
	src/USER-CUDA/pair_eam_cuda.h
	src/USER-CUDA/pair_gran_hooke_cuda.h
	src/USER-CUDA/pair_lj96_cut_cuda.h
	src/USER-CUDA/pair_lj_charmm_coul_charmm_cuda.h
	src/USER-CUDA/pair_lj_charmm_coul_charmm_implicit_cuda.h
	src/USER-CUDA/pair_lj_charmm_coul_long_cuda.h
	src/USER-CUDA/pair_lj_class2_coul_cut_cuda.h
	src/USER-CUDA/pair_lj_class2_coul_long_cuda.h
	src/USER-CUDA/pair_lj_class2_cuda.h
	src/USER-CUDA/pair_lj_cut_coul_cut_cuda.h
	src/USER-CUDA/pair_lj_cut_coul_debye_cuda.h
	src/USER-CUDA/pair_lj_cut_coul_long_cuda.h
	src/USER-CUDA/pair_lj_cut_cuda.h
	src/USER-CUDA/pair_lj_cut_experimental_cuda.h
	src/USER-CUDA/pair_lj_expand_cuda.h
	src/USER-CUDA/pair_lj_gromacs_coul_gromacs_cuda.h
	src/USER-CUDA/pair_lj_gromacs_cuda.h
	src/USER-CUDA/pair_lj_sdk_coul_long_cuda.cpp
	src/USER-CUDA/pair_lj_sdk_coul_long_cuda.h
	src/USER-CUDA/pair_lj_sdk_cuda.h
	src/USER-CUDA/pair_lj_smooth_cuda.h
	src/USER-CUDA/pair_morse_cuda.h
	src/USER-CUDA/pair_sw_cuda.h
	src/USER-CUDA/pair_tersoff_cuda.h
	src/USER-CUDA/pair_tersoff_zbl_cuda.h
	src/USER-CUDA/pppm_cuda.h
	src/USER-CUDA/verlet_cuda.cpp
	src/USER-CUDA/verlet_cuda.h
	src/comm.cpp
	src/finish.cpp
	src/fix_rigid_nvt.h
	src/respa.cpp
	src/run.cpp
2012-06-07 16:42:38 -04:00
ef9e700545 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8226 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-06 22:47:51 +00:00
6214cf2944 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	src/USER-CUDA/fix_npt_cuda.cpp
	src/USER-CUDA/fix_nvt_cuda.cpp
	src/USER-OMP/fix_omp.cpp
	src/fix.h
	src/memory.cpp
	tools/restart2data.cpp
2012-02-02 09:13:06 -05:00
f884a7ec85 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7647 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-01 16:27:41 +00:00
0b2c652aa9 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7641 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-02-01 15:46:16 +00:00
783142ff2e Merge branch 'master' into lammps-icms 2012-01-31 08:38:34 -05:00
5ffc4b9bc1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7614 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-01-31 00:29:58 +00:00
4df037aa3b use a namespace with static const to propagate fix flags safely. 2012-01-30 18:15:25 -05:00
0f4a27ad8b add c++ emacs cookies into all SCM managed headers 2011-12-23 18:27:40 -05:00
15203cb792 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7039 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-10-06 17:55:48 +00:00
19e8c92a90 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7003 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-23 18:06:55 +00:00
139d3174d5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6830 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-08-27 19:03:30 +00:00
029a4d2df2 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6780 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-08-24 14:11:14 +00:00
0cfaaee5d5 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6724 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-08-18 15:03:14 +00:00
775f182d1f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6709 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-08-17 21:25:29 +00:00
f62b317d37 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6452 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-20 16:42:39 +00:00
66c9d6b22e git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6399 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-14 00:22:15 +00:00
db6648273c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6383 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-13 23:28:04 +00:00
c063c3dc41 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6375 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-13 21:58:21 +00:00