Commit Graph

290 Commits

Author SHA1 Message Date
1ba77e1629 apply utils::logical() in more places 2021-09-21 14:15:02 -04:00
41a3eccd1c apply utils::logical() to more commands 2021-09-21 07:48:50 -04:00
f7bd07b3e6 whitespace 2021-09-18 17:03:03 -04:00
bca99f684f update list and order of include files from include-what-you-use analysis 2021-09-18 14:16:48 -04:00
a47df02f79 modernize 2021-09-16 00:54:46 -04:00
36b3ee32a4 simplify 2021-09-15 16:46:33 -04:00
1fdba7280e small optimization 2021-09-15 15:14:52 -04:00
e1e13a9563 remove extra white space 2021-09-01 12:54:57 -05:00
f4634511fd minor 2021-09-01 12:34:36 -05:00
b2b807f9b9 initial version of AMOEBA/HIPPO force field files 2021-08-25 13:53:31 -06:00
2a06484511 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master2 2021-08-20 10:53:04 -04:00
034c337aaf reformat 2021-07-16 12:05:45 -04:00
878795e64a bulk rename of remaining USER- packages 2021-06-29 20:12:59 -04:00
1dc25b0e10 rename USER-OMP to OPENMP 2021-06-29 17:48:22 -04:00
b124de3484 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master 2021-06-07 22:48:51 -04:00
09c19a936b update URLs in source code and manual 2021-05-24 14:18:20 -04:00
d1941392d3 disable clang-format for all existing .cpp files (for now) 2021-05-05 23:53:38 -04:00
0beac58e21 some file permissions 2021-04-27 15:38:39 -04:00
1e294111e7 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master 2021-04-27 14:46:33 -04:00
6b04ebd617 Merge branch 'master' into varargs-log-error-functions 2021-04-26 13:27:58 -04:00
e9e0bb71b6 Use varargs version of Error:all() and Error::one() where applicable 2021-04-25 21:30:51 -04:00
fe063b27c7 silence compiler warnings 2021-04-23 15:51:16 -04:00
2e5079371a must delete command explicitly now 2021-04-14 07:26:34 -04:00
75579fc100 take advantage of having the common Command base class to unify code paths 2021-04-14 07:05:00 -04:00
c16e4f241f replace "leaky" call to putenv() with setenv() on non-windows platforms 2021-04-09 20:37:01 -04:00
a69c5a5cae fix bugs in shell putenv and getenv style variables. add more unit tests. 2021-04-09 20:19:04 -04:00
0b73ab96d2 avoid replicated code, consolidate variables and element mapping 2021-03-27 12:09:36 -04:00
5ba57fdd44 forgot to delete this line 2021-03-17 00:21:40 -04:00
2dc0b70575 simplify some more code by using utils::strdup() 2021-03-17 00:10:01 -04:00
423772b1fa avoid strtok() when processing the "partition" command 2021-03-11 06:46:40 -05:00
4f219a94aa nolabel for write_data
also bug fixes
2021-01-31 16:37:09 -05:00
b92adfaf6f pointer and style issues 2021-01-31 14:59:10 -05:00
2ee6e8f582 more docs
also, relax I <= J requirement for pair_coeff, as 'required' by type labels
2021-01-30 21:22:49 -05:00
e3a6afe1ab labelmap map/assign docs 2021-01-29 23:38:25 -05:00
f6fe554b47 basic support for auxiliary label maps
can be created with labelmap via mapID keyword
referenced like mymapID::C
where C is an atom type, for example
2021-01-29 22:38:33 -05:00
8e255f619b compiler issues 2021-01-29 19:12:26 -05:00
797555b5ce toward multiple maps 2021-01-28 23:44:02 -05:00
0b4256e67a valid numeric type strings can include * 2021-01-26 22:55:19 -05:00
a119164496 add utf-8 check, substitution, and warning to Input::parse() function 2021-01-25 20:53:59 -05:00
5d2e3b3ecb direct support for coeff commands
pair_coeff, bond_coeff, angle_coeff, dihedral_coeff, improper_coeff
2021-01-25 20:08:25 -05:00
a0c4fac428 assume type labels begin with letter 2021-01-19 22:56:06 -05:00
739dc46fab type labels: restart support 2021-01-19 21:52:22 -05:00
e138cf2476 add labelmap command 2021-01-15 21:46:40 -05:00
96fa85f61c alternate implementation of pair/only option (for KOKKOS and GPU) 2020-12-17 22:39:36 -05:00
371b1a80e3 add support for '-in none' for multi-partition runs from the library interface 2020-11-19 18:58:21 -05:00
adf74b3a22 use https://lammps.sandia.gov based URLs consistently 2020-10-21 16:45:30 -04:00
26ad664079 Avoid string duplication and remove memory leak 2020-09-25 13:44:28 -04:00
0f6a34775c Merge branch 'master' into symbolic-atom-constants 2020-09-15 17:44:31 -04:00
618b08dcfc Merge branch 'master' into symbolic-atom-constants 2020-09-15 14:58:13 -04:00
326d9f398c Merge branch 'master' into iss2345 2020-09-15 14:06:16 -04:00