Commit Graph

17595 Commits

Author SHA1 Message Date
08ac695a06 move include statements from headers to implementation files where possible in USER-REAXC 2019-06-27 01:03:08 -04:00
17602b4c26 some more include file cleanup.
include cstdlib where functions like atoi() are used
remove unneeded include statements from headers
2019-06-27 01:02:17 -04:00
f7507512b1 apply memory alignment settings from my_page.h to my_pool_chunk.h 2019-06-27 00:39:47 -04:00
ff36bad099 cleanup includes in variable.h 2019-06-27 00:33:48 -04:00
7f342b1cd0 Merge pull request #1539 from junghans/fix_include_for_ppc64le
add missing include needed on ppc64le
2019-06-27 00:26:33 -04:00
8c3d18520d add missing include needed on ppc64le 2019-06-26 10:45:31 -06:00
8fd1aaba7e Merge pull request #1535 from evoyiatzis/class2
Implementation of inner/middle/outer compute methods for lj/class2/coul/long
2019-06-25 06:00:06 -04:00
50e76ff7a1 restore virtual keyword and empty lines in comments 2019-06-25 05:59:29 -04:00
423eebda25 restore header 2019-06-25 05:57:48 -04:00
f6842e643e Merge pull request #1525 from akohlmey/collected-small-changes
Collected small changes and fixes for the next patch
2019-06-24 23:55:50 -04:00
5f7c4fb668 Merge pull request #1534 from uihsnv/archlinux_pkg
Archlinux install documentation
2019-06-24 23:55:09 -04:00
a36d2573cf make certain, we are not mixing cutoff and long-range coulomb when looking cutoffs 2019-06-24 09:10:00 -04:00
8b49cac86a correct dimensionality of cut_coul property in Pair::extract() 2019-06-24 09:09:22 -04:00
2159a8c44a Arch specific words 2019-06-24 16:14:29 +05:30
3e93881e44 store compute_tally array in restart and read it back. fix memory leak. 2019-06-24 05:28:54 -04:00
171d74f2f2 remove class member name clashes. Pointers contains infile so we rename other uses to inpfile 2019-06-23 16:43:54 -04:00
f31faafeec modification in the doc file of lj/class2 style 2019-06-23 20:18:39 +02:00
3b6cc29f64 Implementation of inner/middle/outer compute methods for lj/class2/coul/long 2019-06-23 20:16:25 +02:00
58f9380c45 Archlinux install documentation
Link to #1495
2019-06-22 19:46:21 +05:30
f190647ab4 use snprintf() instead of sprintf() to avoid buffer overflows when copying style names 2019-06-21 21:23:20 -04:00
7a56a4be24 add option to pair_modify to explicitly turn off F dot r 2019-06-21 14:18:18 -04:00
c79044c361 Merge pull request #1531 from athomps/snap-yarray-tweak
Added NULL initialization for snaptr
2019-06-21 10:38:43 -04:00
c460d05bc6 Added NULL initialization for snaptr 2019-06-21 00:26:44 -06:00
a01421db99 Merge branch 'master' into collected-small-changes
# Conflicts:
#	doc/src/pair_spin_dipole.txt
2019-06-20 14:38:51 -04:00
f1034e982d Merge pull request #1530 from eagunn/iss1526
Minor cleanup for doc/src
2019-06-20 13:23:21 -04:00
6760866f44 integrate pair styles spin/dipole/cut and spin/dipole/long properly into docs 2019-06-20 11:49:53 -04:00
17bfed3590 move non-LaTeX images from doc/src/Eqs folder to doc/src/JPG
this also updates links in doc sources referencing them
2019-06-20 11:39:41 -04:00
bc224bc66e Eliminate a doc build warning. pair_spin_dipole.txt was recently edited. Much content was removed and it no longer contained any internal reference links. But it still had a link anchor at the bottom. This was generating a build warning. I've removed the unused link anchor and an unneeded line separator. 2019-06-20 09:15:40 -06:00
c9fc83ef6f Move two non-equation images from Eqs folder to JPG folder 2019-06-20 08:16:20 -06:00
f54ad09668 recreate missing LaTeX files for image-only equations 2019-06-19 17:53:40 -04:00
599ef78161 put dump_modify after the list of all dump variant doc pages 2019-06-19 17:13:06 -04:00
f8f8e441b9 add missing cmake package module 2019-06-19 07:06:54 -04:00
bb11344424 Merge pull request #1522 from akohlmey/next_version
Step version string for next patch release
patch_18Jun2019
2019-06-18 22:01:42 -04:00
e754fb80a4 Merge pull request #1518 from akohlmey/collected-small-changes
Collected small changes and fixes for the next patch release
2019-06-18 16:21:41 -04:00
98fbaef406 workaround for ICE issue with gcc 4.8.x 2019-06-18 15:00:27 -04:00
d98c105d34 step version string to 18 June 2019 2019-06-18 11:52:09 -04:00
961dcfc261 mention alternate build environment generators for cmake 2019-06-18 11:50:06 -04:00
81cdce9b04 flag and document that USER-TALLY computes are not compatible with dynamic groups 2019-06-18 00:14:48 -04:00
995b6b31a2 flag a couple more packages that contain sub-builds of downloaded code 2019-06-17 16:05:54 -04:00
e9666f585f update log files for kolmogorov/crespi/full potential 2019-06-17 15:46:54 -04:00
f4f4a7c850 adapt for Ninja build tool, which cannot handle sub-builds and fortran
so builds of downloaded libraries are not supported right now
2019-06-17 14:24:51 -04:00
5fc3081a55 make building tools (msi2lmp, chain.x) an option, which is off by default 2019-06-17 14:23:30 -04:00
a39a35af20 Merge pull request #1517 from jrgissing/bond/react-clarify-template-check-messages
Bond/react: clarify reaction-template warning messages
2019-06-17 14:14:53 -04:00
1452d3d25b Merge pull request #1516 from gtribello/master
Using PLUMED to compute committor with LAMMPS
2019-06-17 14:14:37 -04:00
2dea4eb0e9 Merge pull request #1513 from akohlmey/user-tally-vs-hybrid
Make USER-TALLY compute styles compatible with hybrid pair styles
2019-06-17 14:14:06 -04:00
5d73b0790f Merge pull request #1510 from evoyiatzis/respa_class_2
Implementation of inner/middle/outer compute methods for lj/class2
2019-06-17 14:13:47 -04:00
93fd33aad9 Merge pull request #1507 from athomps/yarray
Back-porting of Zombie SNAP improvements
2019-06-17 14:13:28 -04:00
6536399fc3 Merge pull request #1476 from uihsnv/log_spacing
A function logfreq3(), for logarithmic spacing
2019-06-17 14:12:59 -04:00
2f29bd29f4 Merge pull request #1430 from ndtrung81/gpu-neigh-hybrid
Enable neighbor build on the device for pair hybrid substyles
2019-06-17 14:12:40 -04:00
b1458ceebf fix typo 2019-06-17 07:42:18 -04:00