Commit Graph

24946 Commits

Author SHA1 Message Date
e7e2d2323b Feb2021 GPU Package Update - GPU Package Files 2021-02-15 08:20:50 -08:00
16004e8f45 Merge pull request #2587 from akohlmey/next-patch-version
Step version strings for next patch release
patch_10Feb2021
2021-02-10 21:30:20 -05:00
8eb79cf329 Merge pull request #2596 from lammps/create-bonds-bugs
fix issues with multiple uses of create_bonds command
2021-02-10 20:35:55 -05:00
5c415a1ba3 use neighbor->nrequest to be safer, since neighbor->nlist may be larger 2021-02-10 20:14:19 -05:00
697f82c145 whitespace 2021-02-10 18:40:25 -05:00
cb7e68644f fix issues with multiple uses of create_bonds command 2021-02-10 16:21:25 -07:00
11d99d9513 Merge pull request #2545 from akohlmey/citation-refactor
Refactor citation handling in LAMMPS
2021-02-10 18:19:21 -05:00
f8a5991416 rearrange output a little bit 2021-02-10 17:43:18 -05:00
6adcb4f5b9 Merge pull request #2594 from lammps/voigt-doc
Voigt documentation
2021-02-10 15:08:11 -05:00
95a4ac157b update a few more comments 2021-02-10 14:27:17 -05:00
006de01c05 update false positives list for spell checking 2021-02-10 12:20:04 -05:00
6c1f1df7e2 Merge pull request #2592 from akohlmey/fix-python-issues
Fix a few python module/interface issues with python2.x
2021-02-10 12:02:19 -05:00
5fecd9ed72 more Voigt clarifications 2021-02-10 09:58:53 -07:00
761527e563 clarified Voigt ordering and non-Voigt ordering for virial[6] 2021-02-10 09:55:28 -07:00
11341a5b66 enforce documented Python version requirement for MLIAP with Python 2021-02-10 08:57:14 -05:00
bbb355b1f5 check error status of calls to Python and if they failed print error and terminate 2021-02-10 00:29:39 -05:00
71139ffc9c change version strings to 10 Feb 2021 2021-02-09 21:34:08 -05:00
2dd3b368cd do not install mliap python support for python 2.x 2021-02-09 20:57:08 -05:00
fff1c0c9a7 rename numpy.py to numpy_wrapper.py to avoid lookup conflicts with python2.7 2021-02-09 20:56:33 -05:00
2beef8580a Merge pull request #2589 from akohlmey/check-python-version-match
Add version check for liblammps vs. python module
2021-02-09 16:22:20 -05:00
cc8d435502 Merge pull request #2591 from akohlmey/collected-small-changes
Correct some inconsistencies
2021-02-09 15:09:12 -05:00
903433d9dd use datetime module to convert string date to numeric date 2021-02-09 14:22:37 -05:00
62a152e4a2 get version number from package version instead of rewriting the __init__.py file 2021-02-09 14:13:18 -05:00
e7bcd1ea43 must purge python/build folder so we don't inherit outdated files 2021-02-09 14:12:43 -05:00
f92e07185b initialize arrays for per-level gridcomm buffers to NULL 2021-02-09 13:21:04 -05:00
418135667f address a whole bunch of spelling issues that suddenly popped up. 2021-02-09 12:38:46 -05:00
653c296246 document __version__ module member and version check 2021-02-09 12:29:14 -05:00
65affd6f12 Merge branch 'master' into check-python-version-match 2021-02-09 11:44:29 -05:00
e706f75d17 fix permissions 2021-02-09 11:44:26 -05:00
5646714470 update example inputs and logfile for fix_modify energy yes/no changes, where needed 2021-02-09 11:01:34 -05:00
d26c744e54 should use ev_init() not ev_setup() 2021-02-09 09:17:08 -05:00
b53b993c68 recover in-place usage by defaulting to version 0 and changing it back after installation 2021-02-09 02:12:37 -05:00
09edb26101 Merge pull request #2586 from akohlmey/collected-small-changes
Final small changes and bugfixes for the patch release.
2021-02-09 01:10:51 -05:00
86b3e8ba2a fix permisssions 2021-02-09 00:52:17 -05:00
7f338a17af fix whitespace 2021-02-09 00:42:30 -05:00
2d1f9646a3 update src/.gitignore 2021-02-09 00:40:55 -05:00
7826b58f73 add check to lammps python module to check consistent versions between module and shared library 2021-02-09 00:38:17 -05:00
1b48ac0eaf Merge branch 'master' into collected-small-changes 2021-02-08 22:46:21 -05:00
db26902393 Merge pull request #2560 from lammps/thermo-energy
Standardize fix contributions to energy and virial, remove THERMO_ENERGY mask
2021-02-08 22:45:23 -05:00
d2b3677d6f whitespace fixes 2021-02-08 21:45:58 -05:00
11866dfcb4 avoid segfault when accessing fix compute data before the fix is initialized 2021-02-08 21:20:25 -05:00
82dc03ab3d update examples and log files for cases affected by the fix_modify changes 2021-02-08 21:17:52 -05:00
6f08e81bf8 don't access uninitialized data and avoid shadowing a class member variable 2021-02-08 20:19:22 -05:00
5e55ab0e9b silence compiler warnings 2021-02-08 20:19:01 -05:00
72ce5c6238 Merge branch 'thermo-energy' of github.com:lammps/lammps into thermo-energy 2021-02-08 20:04:46 -05:00
a6aabc0a93 fix typo 2021-02-08 20:03:13 -05:00
56ae498814 reduce memory leakage in kspace style msm 2021-02-08 17:27:54 -05:00
c5bb414c37 remove dead code 2021-02-08 17:26:39 -05:00
0797d15219 Merge branch 'thermo-energy' of github.com:lammps/lammps into thermo-energy 2021-02-08 14:15:00 -07:00
6909cf9dd5 Uncomment Kokkos code 2021-02-08 14:14:38 -07:00