Commit Graph

7403 Commits

Author SHA1 Message Date
4f4bc427ae implement LAMMPS_LIB_NO_MPI to LAMMPS_LIB_MPI change 2020-10-08 21:50:15 -04:00
9f0002550e Merge pull request #2404 from akohlmey/fortran-portable-string
Make f2c_string utility function of the new Fortran module portable across Fortran compilers
2020-10-08 20:58:51 -04:00
4a856148ad Merge pull request #2389 from kateryna-goloviznina/coul_tt
Pair style for charge-dipole damping with Tang-Toennies function
2020-10-08 19:47:36 -04:00
677e8afdc5 update section headlines 2020-10-08 10:32:02 -04:00
a89741f7f6 more 'doc page' to 'page' changes 2020-10-08 08:32:15 -04:00
fdbcd202fa Consolidate the redundant instructions for building the manual into one location. 2020-10-08 08:31:58 -04:00
60864f021f replace "doc page" with "page" or equivalent 2020-10-07 22:29:26 -04:00
e683585bba reformat reax/c control file parameter descriptions 2020-10-07 22:28:34 -04:00
353158f7e7 improve errors vs. exception not 2020-10-07 21:56:14 -04:00
20e1697dba add ":class: note" to admonitions where it was missing for consistent formatting 2020-10-07 20:24:56 -04:00
08f8e7ed28 update titles as suggested by steve and move a few entries around 2020-10-07 20:07:30 -04:00
ac6e99ae81 implement "mem" command into LAMMPS shell to print current and max memory use 2020-10-07 18:36:43 -04:00
50bfb9142d add library API to print OS/Compiler info (for use with LAMMPS shell) 2020-10-07 18:35:59 -04:00
57cc8d6290 fix incorrectly formatted "notes" 2020-10-07 18:35:05 -04:00
395906b387 whitespace 2020-10-07 13:07:57 -04:00
5fa1cd7e86 small corrections 2020-10-07 05:33:55 -04:00
355c68f304 Merge branch 'master' into progguide-axel 2020-10-06 21:40:43 -04:00
f0f933a711 allow forward slash in strings for if statements 2020-10-06 18:44:26 -04:00
15f9987c32 add custom commands "cd" and "pwd" to the LAMMPS shell 2020-10-06 18:39:22 -04:00
1ee9e4eabd Merge branch 'master' into progguide-axel 2020-10-06 17:11:47 -04:00
9274912a81 add note about no longer supporting PyPar and remove instructions related to it. 2020-10-06 16:19:43 -04:00
2f857176c8 stay compatible with cmake older than version 3.14 2020-10-06 13:45:46 -04:00
1afd9b1c83 update Python installation docs 2020-10-06 12:15:56 -04:00
7dd244a828 Correct fix wall/gran and wall/gran/region docs 2020-10-06 10:45:23 -04:00
5d08f629ab fix typo 2020-10-06 05:30:09 -04:00
e3b8563ed9 correcting spelling errors 2020-10-05 21:28:26 -06:00
dddafb3c92 Merge pull request #104 from lammps/master
rebase
2020-10-05 23:19:23 -04:00
b5db29bae4 revise python in LAMMPS docs 2020-10-05 22:48:57 -04:00
3147dd850c adding corrections to doc page 2020-10-05 20:01:34 -06:00
f2ba00ea9c update label in graph 2020-10-05 21:50:54 -04:00
549e4df506 Merge branch 'progguide-richard' into progguide-axel 2020-10-05 21:04:29 -04:00
80a054471d Merge branch 'progguide-updates' into progguide-richard 2020-10-05 19:31:03 -04:00
5244f49234 Fix broken page 2020-10-05 18:04:30 -04:00
caf434811a Add example to Python_config.rst 2020-10-05 17:54:48 -04:00
b8c66b099d Fix typo 2020-10-05 17:42:43 -04:00
93ed9b4266 Add PyLammps parts 2020-10-05 17:34:50 -04:00
02b10380bc Create ctypes only neighbor list API variant
This moves the lammps.get_neighlist() method to lammps.numpy.get_neighlist().
lammps.get_neighlist() now returns a NeighList object, while the NumPy variants
returns a NumPyNeighList object. The main difference between the two is that while
the ctypes variant returns neighlist elements as

atom idx (int), numneighs (int), neighbors (POINTER(c_int))

the NumPy variant returns

atom idx (int), neighbors (numpy.array)
2020-10-05 16:21:37 -04:00
68147306e7 Add Python_neighbor.rst 2020-10-05 16:15:40 -04:00
e95bab1994 Merge branch 'clean-master2' of github.com:julient31/lammps into exchange-biquadratic 2020-10-05 13:38:37 -06:00
c06348c507 Update Python docs 2020-10-05 15:07:57 -04:00
8f808a5e6e Update Python_usage.rst and Python_module.rst 2020-10-05 14:06:09 -04:00
ed17eabe17 Add missing code highlights 2020-10-05 14:04:44 -04:00
884295eb5f Add example showing Python exception handling 2020-10-05 14:04:14 -04:00
6672568fca Change links 2020-10-05 14:03:50 -04:00
113db3ac73 fold group specific query functions into the more generic ID query functions 2020-10-05 13:41:12 -04:00
f3b33ea0c6 address spelling issues 2020-10-04 14:10:35 -04:00
d1e76068e8 add new APIs to library docs 2020-10-04 14:10:18 -04:00
ffcd905bf1 complete LAMMPS shell docs interation. Warn if exceptions are missing but don't fail 2020-10-04 14:03:34 -04:00
b1cc9949e4 include added introspection into docs 2020-10-03 23:38:22 -04:00
fb1bd3e962 Correct links 2020-10-02 18:01:52 -04:00