Commit Graph

41203 Commits

Author SHA1 Message Date
ea7fd079ce add vcm() and angmom() 2024-10-25 19:14:20 -04:00
e91b5dce78 fix typos 2024-10-25 18:52:50 -04:00
e0c3022ec3 printf debugging 2024-10-25 14:55:51 -04:00
e1a129fbf2 Merge branch 'alphataubio-kokkos-fixes' of https://github.com/alphataubio/lammps-alphataubio into alphataubio-kokkos-fixes 2024-10-24 12:20:14 -04:00
ce830fcdbd Update fix_cmap_kokkos.cpp 2024-10-24 12:20:02 -04:00
56ac4aeedf Merge branch 'develop' into alphataubio-kokkos-fixes 2024-10-24 12:12:12 -04:00
00ff895c0d Update fix_cmap_kokkos.cpp 2024-10-24 12:11:12 -04:00
e04be85b7e Merge branch 'alphataubio-kokkos-fixes' of https://github.com/alphataubio/lammps-alphataubio into alphataubio-kokkos-fixes 2024-10-24 12:07:42 -04:00
4a64b3d9ce add d_exchange_sendlist to pack_exchange_kokkos() 2024-10-24 12:04:41 -04:00
f18850397d whitespace 2024-10-24 09:43:36 -06:00
a844959a07 Combine into a single -Xcudafe flag to simplify everything 2024-10-23 23:00:17 -06:00
3041443e5f Merge pull request #4357 from akohlmey/collected-small-changes
Collected small changes and fixes
2024-10-23 23:25:26 -04:00
73c049459b spelling 2024-10-23 21:10:34 -04:00
fdd2fc4f5d move error check to Compute::init() so they cannot be bypassed by input commands 2024-10-23 21:08:07 -04:00
b682f52d11 fix typos 2024-10-23 21:07:39 -04:00
40e5d53345 Prevent deduplication of -Xcudafe flag 2024-10-23 15:53:56 -06:00
820fe1ee8a Fix compile issue with gcc 2024-10-23 12:18:20 -06:00
b810053d02 document restrictions for bonded interactions 2024-10-23 12:35:50 -04:00
915f636d50 Update GNU Make for new files 2024-10-23 10:28:42 -06:00
ab961a006e Merge remote-tracking branch 'github/develop' into collected-small-changes 2024-10-23 12:25:22 -04:00
558b1c5197 apply clang-format, fix other minor formatting issues, use error->one() 2024-10-23 12:10:28 -04:00
077c77f402 contributions from bonded interactions is broken when running in parallel
see https://matsci.org/t/missing-bond-contributions-from-compute-stress-mop/58455
for details.
2024-10-23 12:09:35 -04:00
46c365f75c Merge branch 'develop' of github.com:lammps/lammps into alphataubio-kokkos-fixes 2024-10-23 09:32:27 -06:00
e214f60d4f Merge pull request #4358 from junghans/cmake_voro_rename
cmake: voro target to upstream name
2024-10-22 21:07:28 -04:00
1ec7ba547d Merge branch 'develop' into alphataubio-kokkos-fixes 2024-10-22 14:47:19 -04:00
22a15c7cf8 cuda bugfix again 2024-10-22 14:15:02 -04:00
5bdd616bcd cuda bugfix 2024-10-22 12:42:49 -04:00
83db9b8fe6 small cleanup and modernization 2024-10-22 10:25:22 -04:00
ec5dfcd0fb remove note that was obsoleted 5 years ago 2024-10-22 09:50:30 -04:00
5c07882a18 fix warning(s) 2024-10-20 18:30:19 -04:00
760d871b7a enabled and apply clang-format 2024-10-19 11:02:53 -04:00
34ab2f862a small tweaks 2024-10-18 22:09:25 -04:00
f128abe002 improve OPLS description 2024-10-18 21:51:43 -04:00
2074b0c400 add check to allow only valid swaps between hybrid sub-styles and document it 2024-10-18 21:49:55 -04:00
73eb7de7aa cmake: voro target to upstream name 2024-10-18 09:26:23 -06:00
86e18b8a24 fix copy-n-modify issue 2024-10-16 10:23:16 -04:00
2ce934fdb9 added section on OPLS-AA taken from https://matsci.org/t/issues-with-opls-force-field-for-ethylene-glycol-simulation/58296/11 2024-10-16 10:05:26 -04:00
9abfe38120 Merge branch 'develop' into collected-small-changes 2024-10-14 22:54:22 -04:00
59bbc5bcc1 Merge pull request #4356 from evoyiatzis/patch-1
add extract() function to few angle and bond styles
2024-10-14 19:25:29 -04:00
38500c647b move cursor to end of log buffer before inserting new text 2024-10-14 09:41:45 -04:00
db3416c4b3 Apply corrections from code review by @simongravelle
Co-authored-by: Simon Gravelle <simon.gravelle@live.fr>
2024-10-14 08:19:53 -04:00
6478cd98e9 add extract() function to angle_mesocnt.cpp 2024-10-14 11:30:20 +02:00
1a6544a04c add extract() function to angle_mesocnt.h 2024-10-14 11:29:47 +02:00
74af88bafd unit test for extract() in angle-amoeba.yaml 2024-10-14 09:43:07 +02:00
0c61cb02cc add extract() function to angle_amoeba.cpp 2024-10-14 09:42:04 +02:00
292ca89cb0 add extract() function to angle_amoeba.h 2024-10-14 09:41:23 +02:00
1e63f031f0 remove empirical filter to remove outliers from corrupted data 2024-10-13 22:52:40 -04:00
1c9daad657 change tutorial download URL to tutorial website 2024-10-13 21:57:17 -04:00
f7291713f5 error out when fix nve is used with additional arguments 2024-10-13 19:34:56 -04:00
8156e56617 be more paranoid about Sphinx updates breaking extensions we use 2024-10-13 19:31:40 -04:00