Commit Graph

22282 Commits

Author SHA1 Message Date
eb91c6feb6 correct data file output format for ZBL style. update reference output. 2020-08-01 14:43:14 -04:00
cc87557fa7 tweak parameters for lj/expand to stabilize test run 2020-08-01 14:24:50 -04:00
6827eb80a8 fix missing initialization bug in lj/cut/coul/wolf and update reference data 2020-08-01 14:18:40 -04:00
a4db52c30f tweak potential parameters for better stability of test run 2020-08-01 14:05:27 -04:00
4c3dc9566c need to explicitly clamp the forces and energy in single function to zero at (implicit) pairwise cutoff 2020-08-01 14:05:04 -04:00
891be9313a fix parameters initialization bug in pair style lj/cubic 2020-08-01 13:37:07 -04:00
d15db7b5a7 fix the atomic numbers in ZBL test 2020-08-01 07:49:06 -04:00
86c53cb211 unit tests for few LJ derivatives and ZBL 2020-08-01 07:39:33 -04:00
75dcd9ae29 Merge pull request #2266 from Vsevak/fix_opencl
Fix handling of CL_DEVICE_TYPE flags
2020-07-31 21:50:33 -04:00
59b5c7c154 Merge pull request #2264 from akohlmey/fix_ttm_parser_update
Refactor parsing of input files in fix ttm and fix ttm/mod
2020-07-31 18:14:54 -04:00
b6b5d369b4 Merge pull request #2265 from abhiShandy/easy-pairs
Unit tests for born, buck, lj96 and mie cut
2020-07-31 15:45:14 -04:00
db47eeb2a9 Fix handling of CL_DEVICE_TYPE flags 2020-07-31 19:21:32 +03:00
067540fef1 diversify exponents in mie/cut test 2020-07-31 12:11:24 -04:00
1017b76c71 reformat pair_coeff section in buck test for better readability 2020-07-31 12:08:00 -04:00
12924346ac unit tests for born, buck, lj96 and mie cut 2020-07-31 11:46:51 -04:00
adde2439a6 Merge pull request #2263 from junghans/gitattributes
Add .gitattributes
2020-07-31 00:18:02 -04:00
1cf7a12a5f trim whitespace before parsing numbers 2020-07-30 23:40:34 -04:00
c3db11a807 fix argument index bug carried over from syncing with fix ttm 2020-07-30 23:40:09 -04:00
4b91ab0d23 add utils::trim() function to remove leading and trailing whitespace from string 2020-07-30 23:39:37 -04:00
3370d2f8de Add .gitattributes
This will help to strip out some developer-only files from the
GitHub generated tarballs.
2020-07-30 10:51:21 -06:00
4a28a708b9 T_initial_set array is only required during reading of the mesh 2020-07-30 10:36:03 -04:00
6a90a2affe consistently check for presence of all input mesh data 2020-07-29 23:43:45 -04:00
7d46aa6185 Merge pull request #2256 from akohlmey/cmake-use-alternate-linker
Use alternate/faster linker if available
2020-07-29 21:40:17 -04:00
c355348ff9 remove local copy of "me" 2020-07-29 21:31:51 -04:00
df3d04662d Merge pull request #2259 from lammps/rcb-tiled-tri
enable comm_style tiled and load-balancing to work for triclinic boxes
2020-07-29 21:23:20 -04:00
dd001e80d2 Merge branch 'master' into rcb-tiled-tri 2020-07-29 20:37:28 -04:00
b00bfc82c8 Merge pull request #1426 from Adrian-Diaz/comm_tiled_sendself_fix
Add bugfix for comm_tiled_sendself
2020-07-29 20:35:33 -04:00
b402b00882 Merge branch 'master' into comm_tiled_sendself_fix 2020-07-29 18:23:51 -04:00
2fa642d95e document custom linker choice 2020-07-29 18:01:17 -04:00
d0b6ce8284 displace target link options (if supported by CMake version) 2020-07-29 17:46:24 -04:00
1f1767f5af convert linker choice to (advanced) choice. only for Clang and GNU at the moment 2020-07-29 17:36:34 -04:00
2923dcbbd6 Merge pull request #2258 from akohlmey/phana-update
Update phana tool for USER-PHONON from GitHub repo
2020-07-29 16:52:47 -04:00
59ff6b7abc Add comment explaining the change 2020-07-29 16:33:54 -04:00
cb98fa00da enable CommStyle tiled and load-balancing to work for triclinic 2020-07-29 14:30:49 -06:00
4d9781f9b6 fix typo an reorder 2020-07-29 11:10:14 -04:00
7df8a63045 update phana tool for USER-PHONON from github 2020-07-29 10:48:04 -04:00
1677b76b6c try using faster alternatives to GNU ld when building (many) test executables 2020-07-28 20:56:32 -04:00
29c50671da Merge pull request #2254 from Vsevak/fix_opencl
Fix corrupted character in GPU package
2020-07-27 20:08:18 -04:00
ae329acd3b Merge pull request #2255 from akohlmey/charset-cleanup
Charset cleanup in (most) source files
2020-07-27 19:41:36 -04:00
477b97f257 remove some more extended ASCII characters 2020-07-27 17:33:35 -04:00
2bb5c53a47 remove/replace extended ASCII characters from comments 2020-07-27 17:15:29 -04:00
634f274a04 whitespace cleanup: replace tabs and remove trailing whitespace 2020-07-27 17:14:53 -04:00
41535d8de3 Merge pull request #2253 from stanmoore1/kk_snap_bug
Fix issue in pair_snap_kokkos
2020-07-27 14:09:43 -04:00
93f14e9bba Fix broken ASCII symbol in GPU package 2020-07-27 20:16:55 +03:00
6dc52dff73 Fix bug in pair_snap_kokkos 2020-07-27 10:30:04 -06:00
884355b335 Merge pull request #2252 from akohlmey/collected-small-changes
Collected small changes and bugfixes
2020-07-27 12:01:18 -04:00
780fb5b376 add test function to validate updated topology data after reset_atom_ids 2020-07-27 10:43:37 -04:00
1fb1a5f461 fix incorrect ubuf decoding bug in reset_atom_ids 2020-07-27 09:48:13 -04:00
94c9cdbc05 print messages about reading potential files only on MPI rank 0 2020-07-27 06:19:35 -04:00
5452f72bd9 convert fix ttm and fix ttm/mod to use tokenizer class for parsing files 2020-07-25 18:03:18 -04:00