Commit Graph

1612 Commits

Author SHA1 Message Date
f72013c5db Update displace.mod
The pressure tensor was not computed as time-averaged quantity but as instantaneous value
2021-03-14 12:36:46 +01:00
6b3f0ddd3b Merge pull request #2647 from agiliopadua/fep
Updated examples in USER-FEP
2021-03-08 23:00:33 -05:00
7ae2da0ace Merge pull request #2641 from pedroantoniosantosf/mliap_nn
Add support for neural network (nn) models to MLIAP package to compute energies and forces without going through Python
2021-03-08 20:27:01 -05:00
f17ac30875 Merge pull request #2590 from markc242/relres-update
New pair style lj/relres
2021-03-08 19:53:03 -05:00
83fddb1123 Merge branch 'master' into fep 2021-03-08 23:21:11 +01:00
ee07c88184 Update fep examples 2021-03-08 23:19:51 +01:00
e26c9387ae Update fep examples CHhyd CH4-CF4 2021-03-08 15:58:18 +01:00
ce4d622b15 Improved CH4hyd examples 2021-03-08 00:05:48 +01:00
eee08204c3 Merge branch 'master' into mliap_nn 2021-03-05 22:14:57 -05:00
502d05c88a update reference log files for lj/relres 2021-03-05 17:54:00 -05:00
38586669f8 Removed compute*.dat and *v2 files 2021-03-04 19:03:11 -03:00
862a5ad2b6 Cleaned up names of PyTorch files 2021-03-03 12:07:45 -07:00
aa5da53b8a more rearranging, tried to elimiante unnecessary name elements 2021-03-03 11:55:26 -07:00
abfc4465b0 Rearranged nn file locations and names 2021-03-03 11:38:05 -07:00
6c0c6ce3b0 example Ta06A using nn 2021-03-03 14:53:56 -03:00
b7367e713a Update in.mliap.snap.nn.Cu 2021-03-03 14:09:03 -03:00
8f9520b4bb Create log.Cu_nn 2021-03-03 13:39:26 -03:00
38d076e22e Updating nn example and mliap .rst 2021-03-03 13:36:00 -03:00
390e6eb965 Merge branch 'master' into fep 2021-03-03 14:01:43 +01:00
21dd629acf correct C7 in Ethanol example for USER-FEP. update logs 2021-03-03 05:36:42 -05:00
e75f1f2f82 Merge branch 'master' into relres-update 2021-02-28 23:20:44 -05:00
175e6c964a Documentation and examples updated according to @sjplimp request 2021-02-28 21:30:55 -05:00
1521c7a370 Merge pull request #2625 from yafshar/kim_citation
Updating the kim citation report to lammps conventions
2021-02-26 20:38:28 -05:00
335a6308d0 update kim query example log file 2021-02-26 13:04:29 -06:00
3d96d0a674 Fix wrong group name output in fix ave/chunk 2021-02-25 15:34:29 -05:00
c16064d493 update kim examples log files 2021-02-25 08:23:26 -06:00
293ebad98f Merge branch 'master' into kim_commands 2021-02-23 09:34:32 -05:00
ab05e9f5c1 update the log files for the kim command examples 2021-02-23 06:11:54 -06:00
d9941b1648 Update in.tiny_nylon.stabilized_variable_probability 2021-02-20 20:29:39 -05:00
6571f238f6 Merge branch 'master' into fep 2021-02-15 14:03:10 +01:00
7584fbb28f Updating fep examples 2021-02-15 13:34:22 +01:00
389f8b040d Testing examples 2021-02-12 20:09:28 -03:00
8f55701da8 adding 'kim query' command examples 2021-02-12 08:03:32 -06:00
12a9b6165a remove old log files 2021-02-12 08:03:32 -06:00
10a48f18d0 update kim command examples 2021-02-12 08:03:21 -06:00
5646714470 update example inputs and logfile for fix_modify energy yes/no changes, where needed 2021-02-09 11:01:34 -05:00
1e3b63c335 add demonstration of using r-RESPA with a FG/CG sites split 2021-02-09 10:15:42 -05:00
1cbb37b92c clean up input and replace log with logs following LAMMPS conventions 2021-02-09 08:42:31 -05:00
9e25dff8b8 do not include generated files in git repo 2021-02-09 08:42:03 -05:00
69f5d840df New pair style lj/relres 2021-02-09 07:29:38 -05:00
86b3e8ba2a fix permisssions 2021-02-09 00:52:17 -05:00
1b48ac0eaf Merge branch 'master' into collected-small-changes 2021-02-08 22:46:21 -05:00
82dc03ab3d update examples and log files for cases affected by the fix_modify changes 2021-02-08 21:17:52 -05:00
d42a165ccf Merge branch 'master' into collected-small-changes 2021-02-08 15:33:22 -05:00
ca1a5731e7 remove files left behind by accident 2021-02-08 12:32:27 -05:00
dde3a8cebb update log files 2021-02-04 21:00:46 -05:00
9a0805529c rename example files 2021-02-04 20:25:26 -05:00
bd1cc91bdd update create atoms example 2021-02-04 20:20:18 -05:00
2bc2140ed9 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master 2021-02-04 14:58:52 -05:00
0c35981e31 fep CH4hyd examples 2021-01-23 19:02:21 +01:00