Commit Graph

1737 Commits

Author SHA1 Message Date
8f60a54656 update USER-RANN example to run faster and provide reference logs 2021-06-22 12:27:05 -04:00
ddc596170e Merge pull request #2803 from akohlmey/collected-small-changes
Collected small changes
2021-06-21 12:59:16 -04:00
a90a48c038 update ASPHERE box/srd example 2021-06-17 10:35:07 -04:00
5a511c2e92 whitespace 2021-06-17 09:56:14 -04:00
ec0f47642a delete old log files 2021-06-14 11:44:05 -07:00
6a4420ba5c updated log files from the latested run 2021-06-14 11:40:45 -07:00
84d04752d3 update log files. make Si example (much) smaller 2021-06-13 17:40:00 -04:00
e64ec4647a Delete dump.myforce.3 2021-06-09 20:45:06 -07:00
06aa6b737e Delete dump.myforce.2 2021-06-09 20:44:56 -07:00
399de7dbf8 Delete dump.myforce.1 2021-06-09 20:44:45 -07:00
b4e9e99067 Delete dump.myforce.0 2021-06-09 20:44:32 -07:00
72ae091aa6 Merge remote-tracking branch 'upstream/master' into mliap_so3_ver2
To have a fetch
2021-06-09 20:31:46 -07:00
75fd4e9eec update 2021-06-09 16:59:59 -07:00
13b8c63e7a Merge branch 'master' into user-dielectric 2021-06-05 11:14:44 -04:00
b9e9dda1ab Updated example input scripts, data files and README 2021-06-02 12:03:46 -05:00
49536ce02c Make compliance.py Python 3 compatible 2021-06-01 15:15:11 -04:00
c12f7e226b More cleanup to fix polarize*, access to the per-atom variables from the Atom class, and updates to doc pages 2021-06-01 11:22:14 -05:00
30e18a1b76 Added compute efield/atom and citation for the fixes polarize* 2021-05-28 16:06:36 -05:00
012003c68a Merge branch 'master' into pair_rann
# Conflicts:
#	cmake/CMakeLists.txt
#	cmake/presets/all_off.cmake
#	cmake/presets/all_on.cmake
2021-05-26 15:17:30 -04:00
9e1db61b41 Merge branch 'master' into pair-style-nnp 2021-05-25 16:44:55 -04:00
2e6a0112d3 update URLs in some more files 2021-05-24 16:19:37 -04:00
2a33e3674e Added src/USER-DIELECTRIC and examples/USER/dielectric 2021-05-24 14:51:28 -05:00
63ecb77303 fix some more URLs 2021-05-24 15:38:27 -04:00
61b1126c3d Merge branch 'master' into pair_rann
# Conflicts:
#	cmake/CMakeLists.txt
#	src/Makefile
2021-05-24 12:21:04 -04:00
10961b8cb6 update to upstream 2021-05-21 16:15:31 -04:00
fb3fdb43a1 Tweak ASPHERE examples 2021-05-17 10:27:57 -06:00
640a46ec3f Fix broken examples 2021-05-17 08:29:54 -06:00
31a55f1f76 Merge branch 'master' of github.com:lammps/lammps into pair-style-nnp 2021-05-16 22:54:29 +02:00
aa6c6169a8 Merge branch 'master' into prepare-clang-format
# Conflicts:
#	src/KOKKOS/nbin_kokkos.h
#	src/KOKKOS/nbin_ssa_kokkos.h
#	src/MOLECULE/bond_fene_expand.h
#	src/USER-DPD/nbin_ssa.h
#	src/USER-DPD/nstencil_half_bin_2d_ssa.h
#	src/USER-DPD/nstencil_half_bin_3d_ssa.h
#	src/USER-INTEL/nbin_intel.h
#	src/USER-MISC/fix_propel_self.cpp
#	src/USER-OMP/npair_full_multi_old_omp.h
#	src/USER-OMP/npair_half_multi_old_newton_omp.h
#	src/USER-OMP/npair_half_size_multi_newtoff_omp.h
#	src/USER-OMP/npair_halffull_newtoff_omp.h
#	src/USER-OMP/npair_halffull_newton_omp.h
#	src/USER-OMP/npair_skip_omp.h
#	src/main.cpp
#	src/nbin_standard.h
#	src/npair_full_multi_old.h
#	src/npair_halffull_newtoff.h
#	src/npair_halffull_newton.h
#	src/npair_skip.h
#	src/npair_skip_respa.h
#	src/npair_skip_size.h
#	src/npair_skip_size_off2on.h
#	src/npair_skip_size_off2on_oneside.h
#	src/nstencil_full_bin_2d.h
#	src/nstencil_full_bin_3d.h
#	src/nstencil_full_ghost_bin_2d.h
#	src/nstencil_full_ghost_bin_3d.h
#	src/nstencil_full_multi_2d.h
#	src/nstencil_full_multi_3d.h
#	src/nstencil_full_multi_old_2d.h
#	src/nstencil_full_multi_old_3d.h
#	src/nstencil_half_bin_2d_newtoff.cpp
#	src/nstencil_half_bin_3d_newtoff.cpp
#	src/nstencil_half_bin_3d_newton_tri.h
#	src/nstencil_half_ghost_bin_2d_newtoff.cpp
#	src/nstencil_half_ghost_bin_2d_newtoff.h
#	src/nstencil_half_ghost_bin_3d_newtoff.cpp
#	src/nstencil_half_ghost_bin_3d_newtoff.h
#	src/nstencil_half_multi_2d.h
#	src/nstencil_half_multi_2d_newtoff.h
#	src/nstencil_half_multi_2d_newton_tri.h
#	src/nstencil_half_multi_2d_tri.h
#	src/nstencil_half_multi_3d_newtoff.h
#	src/nstencil_half_multi_3d_newton_tri.h
2021-05-14 15:24:02 -04:00
f121ae98d6 forget to update 2021-05-13 11:34:58 -04:00
53397fdda5 Expand MDI examples README 2021-05-12 18:31:10 -04:00
64fa70f8d2 Add USER-MDI README file 2021-05-12 18:31:10 -04:00
a731c43000 Add docs for mdi_engine command and fix 2021-05-12 18:31:10 -04:00
2854ea29a5 Add additional MDI examples 2021-05-12 18:31:10 -04:00
4a0b71f66b Add MDI example 2021-05-12 18:31:10 -04:00
e960674cea Merge pull request #2536 from jtclemm/multi_epcc
Add faster method for multi neighboring
2021-05-12 15:25:28 -04:00
8617770592 Merge pull request #2511 from samueljmcameron/fix_bd_sphere
Add USER-BROWNIAN package
2021-05-12 13:51:42 -04:00
1d10147cb6 reformat and shorten new example inputs 2021-05-12 07:53:18 -04:00
986a72ff6e remove executable permissions on non-executable files 2021-05-12 06:32:58 -04:00
f0e52981f2 Merge branch 'master' into multi_epcc 2021-05-12 06:16:52 -04:00
824dff8181 update .clang-format file from src and update files 2021-05-11 22:48:06 -04:00
d8291eea7b Merge branch 'master' into prepare-clang-format
# Conflicts:
#	src/MOLECULE/bond_fene.h
#	src/MOLECULE/bond_fene_expand.h
2021-05-11 21:49:48 -04:00
57a2f21757 add/update USER-BROWNIAN example inputs and logs 2021-05-11 21:13:10 -04:00
92c5951d6c Update to latest changes from upstream 2021-05-11 17:49:03 -04:00
e1b2235d36 Update py_nve.py 2021-05-10 18:42:27 -04:00
147e561dca Update in.fix_python_invoke_neighlist example 2021-05-07 12:51:58 -04:00
49a7bb57de add clang-format support to plugin examples 2021-05-05 23:51:12 -04:00
f12f9166a5 Resolving merge conflicts, updating URLs 2021-05-05 11:19:44 -06:00
6f5881e151 Merge pull request #2710 from msvbd/dpd_extended
Generalized DPD pair styles: dpd/ext and dpd/ext/tstat
2021-04-30 13:26:16 -04:00
b88cdd6890 Corrected implementation of ellipsoidal dynamics, made ashared base class for the time-integrators, templated the time-integrators (and so reversed changes that this PR had previously made to random_mars src files), combined docs of all three integrators. 2021-04-30 16:30:04 +01:00