Commit Graph

522 Commits

Author SHA1 Message Date
757e2f8cff Merge branch 'master' into refactor-reaxff-parser
# Conflicts:
#	doc/src/fix_qeq_reax.rst
#	src/OPENMP/reaxc_bond_orders_omp.h
#	src/OPENMP/reaxc_bonds_omp.h
#	src/OPENMP/reaxc_forces_omp.h
#	src/OPENMP/reaxc_hydrogen_bonds_omp.h
#	src/OPENMP/reaxc_init_md_omp.cpp
#	src/OPENMP/reaxc_init_md_omp.h
#	src/OPENMP/reaxc_multi_body_omp.h
#	src/OPENMP/reaxc_nonbonded_omp.h
#	src/OPENMP/reaxc_torsion_angles_omp.h
#	src/OPENMP/reaxc_valence_angles_omp.h
#	src/OPENMP/reaxff_omp.h
#	src/Purge.list
#	src/QEQ/fix_qeq.cpp
#	src/QEQ/fix_qeq.h
#	src/QEQ/fix_qeq_dynamic.cpp
#	src/QEQ/fix_qeq_fire.cpp
#	src/REAXFF/fix_qeq_reax.cpp
#	src/REAXFF/reaxc_allocate.h
#	src/REAXFF/reaxc_bond_orders.h
#	src/REAXFF/reaxc_bonds.h
#	src/REAXFF/reaxc_control.h
#	src/REAXFF/reaxc_defs.h
#	src/REAXFF/reaxc_ffield.h
#	src/REAXFF/reaxc_forces.h
#	src/REAXFF/reaxc_hydrogen_bonds.h
#	src/REAXFF/reaxc_init_md.cpp
#	src/REAXFF/reaxc_init_md.h
#	src/REAXFF/reaxc_io_tools.cpp
#	src/REAXFF/reaxc_io_tools.h
#	src/REAXFF/reaxc_list.h
#	src/REAXFF/reaxc_lookup.h
#	src/REAXFF/reaxc_multi_body.h
#	src/REAXFF/reaxc_nonbonded.h
#	src/REAXFF/reaxc_reset_tools.h
#	src/REAXFF/reaxc_system_props.cpp
#	src/REAXFF/reaxc_system_props.h
#	src/REAXFF/reaxc_tool_box.h
#	src/REAXFF/reaxc_torsion_angles.h
#	src/REAXFF/reaxc_traj.cpp
#	src/REAXFF/reaxc_traj.h
#	src/REAXFF/reaxc_types.h
#	src/REAXFF/reaxc_valence_angles.h
#	src/REAXFF/reaxc_vector.cpp
#	src/REAXFF/reaxc_vector.h
#	src/REAXFF/reaxff_api.h
#	src/REAXFF/reaxff_defs.h
#	src/REAXFF/reaxff_inline.h
#	src/REAXFF/reaxff_types.h
#	src/text_file_reader.cpp
#	src/text_file_reader.h
#	unittest/force-styles/tests/atomic-pair-reax_c.yaml
#	unittest/force-styles/tests/atomic-pair-reax_c_lgvdw.yaml
#	unittest/force-styles/tests/atomic-pair-yukawa_colloid.yaml
2021-07-12 14:25:47 -04:00
05f28661f2 temporarily skip some tests for REAXFF until working on PR #2708 2021-07-12 05:43:04 -04:00
bc4f2b65ae the INTEL package does not support pair_modify nofdotr
- no need to test for it
- add a check and report an error if the nofdotr setting is used
2021-07-12 05:19:41 -04:00
bc08d9a973 temporarily skip testing pair_modify nofdotr for reax/c until we merge PR #2708 2021-07-11 20:14:10 -04:00
6134164ad3 pair style rann does not support per-atom stress or pair_modify nofdotr 2021-07-11 20:03:52 -04:00
d774cd5ddc fix sign errors and pair_modify nofdotr behavior for pair style bop 2021-07-11 19:27:49 -04:00
7e3e786530 fix up pair style polymorphic for pair_modify nofdotr 2021-07-11 19:19:41 -04:00
50da38722a make airebo compatible with pair_modify nofdotr 2021-07-11 08:47:30 -04:00
bfc9df1302 exclude tersoff/intel. fix newton off instantiation. 2021-07-11 00:53:26 -04:00
0e55c2c4f2 Merge branch 'master' into nofdotr-tests-and-updates
# Conflicts:
#	unittest/cplusplus/test_lammps_class.cpp
2021-07-10 22:36:43 -04:00
b2a396da3c Merge pull request #2828 from tomswinburne/snap-scale
Adding scale parameter to pair/snap for fix/adapt
2021-07-07 16:10:11 -04:00
9b31ed511b Merge branch 'fm' into ssc 2021-07-06 17:31:58 +02:00
40e83088b0 update SNAP unit tests for added extract keyword 2021-07-06 11:11:35 -04:00
455b7b9392 remove single precision floating point math and reformat 2021-07-04 18:24:46 -04:00
878795e64a bulk rename of remaining USER- packages 2021-06-29 20:12:59 -04:00
1dc25b0e10 rename USER-OMP to OPENMP 2021-06-29 17:48:22 -04:00
dc3efd17d2 rename USER-MEAMC to MEAM and pair style meam/c to meam (keeping meam/c as an alias) 2021-06-29 16:59:05 -04:00
ddc596170e Merge pull request #2803 from akohlmey/collected-small-changes
Collected small changes
2021-06-21 12:59:16 -04:00
2624e3fd8f add unit test for pair style rann 2021-06-20 22:14:06 -04:00
a4c8650d2a plug memory leaks in USER-PACE 2021-06-20 21:29:49 -04:00
2ca0a4df98 add unit test for MLIAP SO3 descriptor 2021-06-13 17:45:00 -04:00
fde2295685 add comments to suppress useless warnings from LGTM 2021-05-31 12:01:50 -04:00
58625d800e also make CMake scripts in unittest tree consistent 2021-05-25 15:10:18 -04:00
2e6a0112d3 update URLs in some more files 2021-05-24 16:19:37 -04:00
ba854ec7c3 changes required to cross-compile unit tests for windows 2021-05-23 01:46:14 -04:00
9483db9581 Merge branch 'prepare-clang-format' of github.com:akohlmey/lammps into prepare-clang-format 2021-05-14 17:21:18 -04:00
8617770592 Merge pull request #2511 from samueljmcameron/fix_bd_sphere
Add USER-BROWNIAN package
2021-05-12 13:51:42 -04:00
ee546e2fa3 Merge pull request #2758 from akohlmey/collected-small-changes
Collected small changes and fixes for the next patch release
2021-05-11 19:31:12 -04:00
92c5951d6c Update to latest changes from upstream 2021-05-11 17:49:03 -04:00
883d55f416 skip running GPU test if there is no viable GPU device 2021-05-11 13:42:25 -04:00
18b066c034 seems we can use a tighter epsilon on the revised pair styles bop/polymorphic 2021-05-05 12:11:27 -04:00
2a903f85de update unit test reference data 2021-05-05 12:02:32 -04:00
09684b776f Merge pull request #2750 from akohlmey/update-bop
Updated pair style bop
2021-05-04 20:59:26 -04:00
9137c579ba update bop unit tests 2021-05-04 00:07:49 -04:00
199e750eb1 small tweaks to pass unit tests on FreeBSD 2021-05-03 16:33:04 -04:00
3a6e27e0e8 must skip nofdotr test for sw since that requires newton on with /intel 2021-04-27 12:33:33 -04:00
9a09378136 can only use and test fdotr with USER-INTEL when newton pair is off 2021-04-27 09:53:20 -04:00
73f4346056 add nofdotr test 2021-04-27 09:00:04 -04:00
7ec8d025c8 tweak epsilon to adjust for numeric noise when using pair_modify nofdotr 2021-04-27 08:29:21 -04:00
57a7bd7186 adjust for changed CMake variable scope due to moving script code 2021-04-26 20:16:55 -04:00
9e7d26351d tweak epsilon for GPU package tests 2021-04-24 07:13:06 -04:00
a438c2bc7b tweak unit test YAML epsilon values for GPU mixed precision tests to pass 2021-04-23 05:43:03 -04:00
9b59e901bc update reax/c tests. disable OpenMP tests as that code is broken. 2021-04-21 09:54:59 -04:00
d2008aa362 add test for reaxff using coulomb tabulation 2021-04-21 01:19:45 -04:00
08f4c30051 Merge branch 'master' into refactor-reaxff-parser 2021-04-20 20:52:18 -04:00
b014e8b94f revert standard reax/c test 2021-04-20 17:15:52 -04:00
c543815692 small tweaks 2021-04-20 15:28:42 -04:00
daaebd55a6 add QEQ parameter file 2021-04-20 14:56:27 -04:00
678e243430 small update of unit test inputs 2021-04-20 14:54:14 -04:00
ae570c05d8 we don't need to hardcode pair styles to skip specific tests, but use YAML file for it 2021-04-20 14:53:44 -04:00