Commit Graph

33 Commits

Author SHA1 Message Date
5b0c62a2a0 Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	src/USER-MISC/bond_harmonic_shift.cpp
	src/USER-MISC/bond_harmonic_shift_cut.cpp
2013-11-26 13:39:09 +01:00
95637841ec sorting and buffering not allowed at the same time. 2013-11-25 18:20:20 +01:00
819b351f3f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11057 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-11-25 16:29:18 +00:00
b8c2731c4b temporarily disable output buffering for cfg and xyz dumps 2013-11-24 11:26:27 +01:00
dc1278ee51 Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
	doc/Section_commands.txt
	doc/Section_start.txt
	doc/dump_image.txt
	doc/dump_modify.txt
	doc/write_dump.txt
	src/USER-PHONON/fix_phonon.cpp
	src/dump_movie.cpp
	src/write_dump.cpp
2013-11-05 13:37:27 +01:00
5f9001a59d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@10935 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-11-04 16:59:03 +00:00
4bcaac41a0 Merge remote branch 'lammps-ro/master' into lammps-icms
Resolved Conflicts:
	doc/Manual.txt
2013-04-17 11:16:45 +02:00
d8509b5842 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@9772 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2013-04-12 22:24:18 +00:00
48aa45f7f0 Merge branch 'master' into lammps-icms
Resolved Conflicts (i hope):
	src/REPLICA/neb.cpp
	src/REPLICA/prd.cpp
	src/REPLICA/tad.cpp
	src/REPLICA/verlet_split.cpp
	src/USER-CUDA/atom_vec_angle_cuda.h
	src/USER-CUDA/atom_vec_atomic_cuda.h
	src/USER-CUDA/atom_vec_charge_cuda.h
	src/USER-CUDA/atom_vec_full_cuda.h
	src/USER-CUDA/compute_pe_cuda.h
	src/USER-CUDA/compute_pressure_cuda.h
	src/USER-CUDA/compute_temp_cuda.h
	src/USER-CUDA/compute_temp_partial_cuda.h
	src/USER-CUDA/cuda.cpp
	src/USER-CUDA/cuda.h
	src/USER-CUDA/cuda_data.h
	src/USER-CUDA/cuda_neigh_list.h
	src/USER-CUDA/fft3d_cuda.h
	src/USER-CUDA/fft3d_wrap_cuda.h
	src/USER-CUDA/fix_addforce_cuda.h
	src/USER-CUDA/fix_aveforce_cuda.h
	src/USER-CUDA/fix_enforce2d_cuda.h
	src/USER-CUDA/fix_freeze_cuda.h
	src/USER-CUDA/fix_gravity_cuda.h
	src/USER-CUDA/fix_nve_cuda.h
	src/USER-CUDA/fix_set_force_cuda.h
	src/USER-CUDA/fix_temp_berendsen_cuda.h
	src/USER-CUDA/fix_temp_rescale_cuda.h
	src/USER-CUDA/fix_temp_rescale_limit_cuda.h
	src/USER-CUDA/fix_viscous_cuda.h
	src/USER-CUDA/pair_born_coul_long_cuda.h
	src/USER-CUDA/pair_buck_coul_cut_cuda.h
	src/USER-CUDA/pair_buck_coul_long_cuda.h
	src/USER-CUDA/pair_buck_cuda.h
	src/USER-CUDA/pair_cg_cmm_coul_cut_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_coul_cut_cuda.h
	src/USER-CUDA/pair_cg_cmm_coul_debye_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_coul_debye_cuda.h
	src/USER-CUDA/pair_cg_cmm_coul_long_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_coul_long_cuda.h
	src/USER-CUDA/pair_cg_cmm_cuda.cpp
	src/USER-CUDA/pair_cg_cmm_cuda.h
	src/USER-CUDA/pair_eam_cuda.h
	src/USER-CUDA/pair_gran_hooke_cuda.h
	src/USER-CUDA/pair_lj96_cut_cuda.h
	src/USER-CUDA/pair_lj_charmm_coul_charmm_cuda.h
	src/USER-CUDA/pair_lj_charmm_coul_charmm_implicit_cuda.h
	src/USER-CUDA/pair_lj_charmm_coul_long_cuda.h
	src/USER-CUDA/pair_lj_class2_coul_cut_cuda.h
	src/USER-CUDA/pair_lj_class2_coul_long_cuda.h
	src/USER-CUDA/pair_lj_class2_cuda.h
	src/USER-CUDA/pair_lj_cut_coul_cut_cuda.h
	src/USER-CUDA/pair_lj_cut_coul_debye_cuda.h
	src/USER-CUDA/pair_lj_cut_coul_long_cuda.h
	src/USER-CUDA/pair_lj_cut_cuda.h
	src/USER-CUDA/pair_lj_cut_experimental_cuda.h
	src/USER-CUDA/pair_lj_expand_cuda.h
	src/USER-CUDA/pair_lj_gromacs_coul_gromacs_cuda.h
	src/USER-CUDA/pair_lj_gromacs_cuda.h
	src/USER-CUDA/pair_lj_sdk_coul_long_cuda.cpp
	src/USER-CUDA/pair_lj_sdk_coul_long_cuda.h
	src/USER-CUDA/pair_lj_sdk_cuda.h
	src/USER-CUDA/pair_lj_smooth_cuda.h
	src/USER-CUDA/pair_morse_cuda.h
	src/USER-CUDA/pair_sw_cuda.h
	src/USER-CUDA/pair_tersoff_cuda.h
	src/USER-CUDA/pair_tersoff_zbl_cuda.h
	src/USER-CUDA/pppm_cuda.h
	src/USER-CUDA/verlet_cuda.cpp
	src/USER-CUDA/verlet_cuda.h
	src/comm.cpp
	src/finish.cpp
	src/fix_rigid_nvt.h
	src/respa.cpp
	src/run.cpp
2012-06-07 16:42:38 -04:00
ef9e700545 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@8226 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2012-06-06 22:47:51 +00:00
9259ae8699 Merge branch 'master' into lammps-icms
Resolved Conflicts:
	doc/Eqs/pair_coul_diel.jpg
	doc/Section_commands.html
	doc/Section_commands.txt
	doc/pair_coul_diel.html
	doc/pair_coul_diel.txt
	doc/processors.html
	doc/processors.txt
	examples/USER/imd/bucky_cnt_imd.vmd
	examples/USER/imd/in.bucky-plus-cnt
	examples/USER/imd/in.deca-ala-solv_imd
	examples/USER/imd/in.deca-ala_imd
	lib/gpu/Makefile.fermi
	lib/gpu/Makefile.lincoln
	lib/gpu/Makefile.longhorn
	lib/gpu/Makefile.serial
	lib/gpu/geryon/VERSION.txt
	lib/gpu/pair_gpu_device.cpp
	src/ASPHERE/atom_vec_ellipsoid.cpp
	src/CLASS2/Install.sh
	src/COLLOID/atom_vec_colloid.cpp
	src/DIPOLE/atom_vec_dipole.cpp
	src/GPU/fix_gpu.cpp
	src/GRANULAR/atom_vec_granular.cpp
	src/GRANULAR/fix_pour.h
	src/KSPACE/Install.sh
	src/KSPACE/fft3d.cpp
	src/KSPACE/fft3d.h
	src/KSPACE/kissfft.h
	src/KSPACE/pppm.cpp
	src/KSPACE/pppm.h
	src/KSPACE/pppm_tip4p.cpp
	src/MAKE/Makefile.openmpi
	src/MAKE/Makefile.serial
	src/MANYBODY/pair_airebo.cpp
	src/MANYBODY/pair_comb.cpp
	src/MANYBODY/pair_eam.cpp
	src/MANYBODY/pair_eim.cpp
	src/MANYBODY/pair_sw.cpp
	src/MANYBODY/pair_tersoff.cpp
	src/MANYBODY/pair_tersoff_zbl.cpp
	src/MOLECULE/atom_vec_angle.cpp
	src/MOLECULE/atom_vec_bond.cpp
	src/MOLECULE/atom_vec_full.cpp
	src/MOLECULE/atom_vec_molecular.cpp
	src/Makefile
	src/Makefile.lib
	src/PERI/atom_vec_peri.cpp
	src/USER-CG-CMM/Install.sh
	src/USER-IMD/README
	src/USER-IMD/fix_imd.cpp
	src/USER-IMD/fix_imd.h
	src/USER-SMD/Install.sh
	src/atom_vec_atomic.cpp
	src/atom_vec_charge.cpp
	src/comm.cpp
	src/finish.cpp
	src/fix_box_relax.cpp
	src/fix_deposit.cpp
	src/fix_spring_self.cpp
	src/fix_store_state.cpp
	src/fix_wall.cpp
	src/fix_wall_reflect.cpp
	src/input.cpp
	src/input.h
	src/memory.cpp
	src/memory.h
	src/pair_lj_cut.cpp
	tools/restart2data.cpp
2011-12-31 19:07:46 -05:00
19e8c92a90 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7003 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-23 18:06:55 +00:00
1ba435ee18 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@7000 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-09-23 13:58:33 +00:00
aedbb28b6c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6486 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-30 20:10:18 +00:00
d9824c7583 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6305 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-06-07 15:25:20 +00:00
bc7d4046f1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6253 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-05-31 16:34:45 +00:00
405d127522 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6251 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-05-30 15:46:44 +00:00
7c04f95ce0 Added xsu, ysu, zsu to dump custom and dump cfg
git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@6044 f3b2605a-c512-4ea7-a41b-209d697bcdaa
2011-04-29 23:40:14 +00:00
8ff0659bae git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5947 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-04-15 22:25:19 +00:00
fbb475b9cd git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5835 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-03-25 21:13:51 +00:00
2b168b0890 Merge branch 'master' into lammps-icms 2011-03-15 09:08:32 -04:00
22f987a208 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5778 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-03-11 15:37:52 +00:00
5309043b07 merge in 18Feb patch manually to do ahead of time. 2011-02-23 10:58:54 -05:00
3a720230d9 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5724 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-02-23 15:25:00 +00:00
a47e493dfd Merge branch 'master' into lammps-icms
Conflicts resolved in:
	doc/Section_commands.html
	src/USER-IMD/fix_imd.cpp
	src/finish.cpp
2011-01-10 10:06:21 -05:00
140cdf9485 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@5504 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2011-01-07 21:42:19 +00:00
60a5ec92ac remove executable file permissions where useless. 2010-11-04 18:17:44 -04:00
ded8b22c19 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4795 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-09-15 22:16:20 +00:00
ad1adc6474 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@4504 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-08-19 15:16:31 +00:00
4663686781 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3685 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-01-14 21:11:58 +00:00
124af06d28 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3658 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2010-01-12 16:32:06 +00:00
4900c3d0c0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3598 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-12-21 21:21:22 +00:00
9647012ec7 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@3136 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2009-09-02 16:24:00 +00:00