Commit Graph

1583 Commits

Author SHA1 Message Date
d39d272b28 Merge branch 'collected-small-changes' of github.com:akohlmey/lammps into collected-small-changes 2022-11-02 10:52:20 -04:00
1db5c4b89b silence compiler warnings 2022-11-02 06:17:07 -04:00
edaefd4870 Merge branch 'develop' into collected-small-changes 2022-11-01 12:16:05 -04:00
a001707b22 Merge pull request #3503 from akohlmey/refactor-pair-only
Refactor handling of pair/only flag for GPU and KOKKOS
2022-11-01 12:14:59 -04:00
05aca2bced Merge pull request #3507 from hammondkd/thermo_mod_range
Support thermo_modify format column index ranges
2022-11-01 05:46:04 -04:00
d3d83b45cb adjust floating point error thresholds 2022-10-31 22:46:45 -04:00
b12c3b3587 must compare C vs. Fortran strings with trailing whitespace removed 2022-10-31 22:46:19 -04:00
3dcf5d70a8 must compare C vs. Fortran strings with trailing whitespace removed 2022-10-31 21:56:38 -04:00
131522f241 silence some more compiler warnings 2022-10-31 18:02:58 -04:00
135c6f24ad Merge branch 'develop' into fortran-expansion 2022-10-31 17:57:33 -04:00
27a93f12d5 simplify and make test more specific 2022-10-31 15:00:37 -04:00
23c22b4f4f silence compiler warnings 2022-10-31 13:06:03 -04:00
c214a81526 increase portability and standard conformance 2022-10-31 13:05:53 -04:00
4c0b415487 Implied shape arrays for constants are not allowed in Fortran 2008 and later 2022-10-31 12:05:16 -04:00
87590ad339 Merge branch 'lammps:develop' into fortran-expansion 2022-10-30 15:30:59 -05:00
c157b2dea2 add tests whether simple examples for coupling to the LAMMPS library can run 2022-10-29 03:46:52 -04:00
55dafc110d Unit tests and some off-by-one errors 2022-10-28 19:09:31 -05:00
624e230f4d several bugs fixed; unit tests updated 2022-10-28 00:51:04 -05:00
1de74508c3 Merge pull request #3475 from akohlmey/refactor-testing
Refactor computes and fixes to use array of structs instead of many index arrays
2022-10-27 17:07:52 -04:00
3545b491ee Merge branch 'lammps:develop' into fortran-expansion 2022-10-27 14:15:47 -05:00
336ec056de use googletest aliased targets consistently 2022-10-26 22:37:24 -04:00
e68efc039f Resolved merging conflicts in three files 2022-10-25 14:37:33 -05:00
d96bfcdf06 Merge branch 'develop' into refactor-testing 2022-10-24 20:07:58 -04:00
248b7383c7 Merge remote-tracking branch 'github/develop' into collected-small-changes
# Conflicts:
#	src/DIPOLE/pair_lj_cut_dipole_long.h
#	src/OPENMP/fix_nvt_sllod_omp.h
#	src/PHONON/fix_phonon.h
#	src/SPIN/pair_spin_dipole_cut.h
#	src/SPIN/pair_spin_dipole_long.h
#	src/STUBS/mpi.h
#	src/UEF/fix_nh_uef.h
#	src/fix_nvt_sllod.h
#	tools/coding_standard/homepage.py
2022-10-24 15:50:50 -04:00
3c4b0a0c04 expand homepage checker tool to check a few more folders and apply updates 2022-10-24 10:58:39 -04:00
785b46e57b Implemented lmp_gather_bonds, lmp_find_*_neighlist, lmp_neighlist_num_elements, and their unit tests and documentation 2022-10-24 01:00:48 -05:00
6d8539e74f tweak for portability 2022-10-21 15:42:11 -04:00
112d616e57 unit tests for has_style, style_count, and style_name; added them to docs 2022-10-20 23:22:43 -05:00
60318a5a26 Refactor Fortran properties test into configuration; implemented several configuration functions and wrote unit tests for them; implemented missing unit tests 2022-10-20 20:24:59 -05:00
34121e5545 Implemented decode_image_flags and its unit test; updated documentation 2022-10-20 00:27:57 -05:00
b51c50294e implemented create_atoms and encode_image_flags and unit tests for them; added IMGMASK and friends to extract_setting and unit tests for them; wrote documentation for them 2022-10-19 18:40:12 -05:00
9a732ba513 Fortran implementation of create_atoms + unittests 2022-10-19 09:56:54 -05:00
61c649fccb more strictly follow the Fortran 2003 standard requirements 2022-10-17 18:49:04 -04:00
d8ab00ea78 add CMake check that will refuse compilation of unit tests or skip tests
This is mainly because the default compilers on RHEL/CentOS 7.x are
not sufficient to compile googletest. Also some Fortran module test
requires a working F90 module and others are more recent Fortran compiler.
2022-10-17 18:11:30 -04:00
46a72f685c address portability issues to the flang LLVM Fortran 2018 compiler 2022-10-16 11:48:18 -04:00
7d9076de4d Merge remote-tracking branch 'github/develop' into refactor-testing 2022-10-14 07:29:38 -04:00
2bc0825e4a refactor compute global/atom to use array of struct 2022-10-14 07:29:04 -04:00
874e1522e7 add test for compute reduce/chunk 2022-10-14 07:29:03 -04:00
c47b16c358 cosmetic 2022-10-14 05:08:24 -04:00
fbc0e02cb2 cosmetic 2022-10-14 04:48:54 -04:00
2d236b07ce need to skip tests if MOLECULE package is missing 2022-10-14 04:47:41 -04:00
ec1c6eba11 we cannot test the Pizza.py dump class without the MOLECULE package 2022-10-14 04:46:49 -04:00
0a8dfb73da make lammps_config_has_package() accessible in Python module 2022-10-14 04:46:32 -04:00
8b6c93cb11 silence compiler warning 2022-10-14 04:46:05 -04:00
3a4d4b0756 Merge branch 'fortran-further-tinkering' of github.com:hammondkd/lammps into fortran-further-tinkering 2022-10-05 14:30:30 -05:00
e3b5514b62 I just learned that FORALL is obsolescent in Fortran 2018; removed 2022-10-05 14:30:02 -05:00
723255bf7e Merge remote-tracking branch 'github/develop' into fortran-further-tinkering 2022-10-05 10:52:36 -04:00
80da4c307c silence compiler warnings, avoid integer or buffer overflows 2022-10-05 10:52:17 -04:00
93841b939e add test for compute chunk/spread/atom and compute global/atom 2022-10-04 21:24:59 -04:00
8be7634b5f Merge branch 'collected-small-changes' into pair-zero-full 2022-10-04 14:36:02 -04:00