Commit Graph

17566 Commits

Author SHA1 Message Date
979119a29b backport fixes to KOKKOS and REAXFF from PR #3621 2023-01-31 20:18:38 -05:00
bc66572275 Fix out of bounds access in pair_vashishta_kokkos with skip list 2023-01-31 20:00:45 -05:00
609231675f Allow neighbor class to set newton flag in Kokkos neigh list 2023-01-31 19:55:07 -05:00
ade0718c11 make compatible to non-glibc Linux 2023-01-27 07:26:23 -05:00
31033ff6e0 must initialize "np" in constructor 2023-01-26 18:34:21 -05:00
9a598ba5a8 backport fix pimd bugfix from develop 2023-01-26 15:59:26 -05:00
af5229ba58 swap constexpr back to const 2023-01-26 09:58:26 -05:00
b180200c48 check if variable value is a valid number before converting it 2023-01-26 07:10:50 -05:00
015fa4cb0a update embedded docs 2023-01-25 21:44:04 -05:00
e163b0b1d7 portability improvements for Solaris/OpenIndiana 2023-01-25 21:40:23 -05:00
6b6a47bd3c Small tweaks 2023-01-25 21:21:08 -05:00
4a0a98a0fd Small bugfixes for Kokkos 2023-01-25 21:20:59 -05:00
369ea4fd26 Add this 2023-01-25 21:17:30 -05:00
d63c002bf5 Use group for Kokkos nvt temp compute 2023-01-25 21:17:22 -05:00
ccef293161 remove obsolete comment 2023-01-11 22:11:53 -05:00
4b0de87813 silence compiler warning 2023-01-11 21:59:35 -05:00
fa22aef31b Fix obscure bug in Kokkos neigh list build 2023-01-11 21:53:16 -05:00
cb7544a615 import modernization from upstream 2023-01-11 21:41:58 -05:00
a9be4906b7 import safer ghost cutoff determination for manybody GPU styles from upstream 2023-01-11 21:41:43 -05:00
f8de1b1a75 use official API for utils::logmesg(), stricter/consistent checking for integer and floats 2023-01-11 05:54:35 -05:00
a8d3c43a77 update version 2023-01-11 01:26:35 -05:00
32b020a165 Increase communication cutoff for TIP4P pair styles, if needed
This avoids error of H atom not found when the O atom is a ghost.
2023-01-10 21:55:56 -05:00
c1db230331 Fix bug in Kokkos ReaxFF on GPUs 2023-01-10 21:55:56 -05:00
254c052ecc Fix GPU tag issues in other Kokkos styles 2023-01-10 21:55:56 -05:00
8e889dfa7c offset is not used (by construction of the potential) 2023-01-10 21:55:55 -05:00
5b6a52a646 correct suffix handling with compute fep 2023-01-10 21:55:55 -05:00
55f56deb63 bugfix for minimization with KOKKOS when using fix box/relax 2023-01-10 21:55:55 -05:00
bfe127a720 cosmetic 2023-01-10 21:55:55 -05:00
d95c8911a3 tweak intel compiler settings 2023-01-10 21:55:55 -05:00
0380f9d854 consistently prefix deep_copy() with Kokkos:: 2023-01-10 21:55:55 -05:00
71b1d60363 bugfix for gaussian bond/angle styles to avoid premature truncation of potential 2023-01-10 21:55:55 -05:00
8b1f92fabd better error handling when reading table files 2023-01-10 21:55:55 -05:00
419af0cf28 dead code removal 2023-01-10 21:55:45 -05:00
9030c59932 bugfix for nm/cut argument parsing 2023-01-10 21:55:21 -05:00
ee88078150 bugfix for DPD with exclusions other than 0.0 or 1.0 2023-01-10 21:55:21 -05:00
04451f6072 recover compilation 2023-01-10 21:55:21 -05:00
2364f7f08b bugfix for incorrect stress tally in dihedral style table 2023-01-10 21:55:21 -05:00
7f82a58f51 auto loop optimizations 2023-01-10 21:55:21 -05:00
1caf074ba1 avoid excess string copy in auto loops 2023-01-10 21:55:20 -05:00
34677f78c2 initialize ADIOS dumps only the first time when used in multiple runs 2023-01-10 21:55:20 -05:00
fe138fc75c add support for building/using the ADIOS package without MPI
This needs the ADIOS2 installation being configured accordingly.
2023-01-10 12:38:20 -05:00
31c324ff61 remove references to long obsolete .d dependency files 2023-01-10 12:32:22 -05:00
30564ed8b7 import traditional build system updates and fixes from develop branch 2023-01-10 12:16:59 -05:00
96627d27b1 add support to detect the BuildID of Windows 10 22H2 2022-10-27 12:56:30 -04:00
0ea0e4ce59 modernize calls to access the list of fixes in the Modify class 2022-10-23 03:16:26 -04:00
d53d4b4d99 use inline insertion sort for short array 2022-10-23 03:16:13 -04:00
b37cd14dd1 avoid superfluous calls to utils::strdup and improve error messages 2022-10-23 03:15:58 -04:00
a921a6bdc1 silence compiler warning about not copying the final null byte 2022-10-23 03:15:47 -04:00
8d70960e2d bond/react: create atoms error check
check that post-reaction template has 'Coords' section if it has 'CreateIDs' section
2022-10-23 03:15:12 -04:00
5661703b30 Update pair_threebody_table.cpp
Correcting for hard coded ntheta = 79 in the extreme case that theta is exactly equal to 180.0 degrees.
2022-10-23 03:13:50 -04:00