Commit Graph

2202 Commits

Author SHA1 Message Date
f8bf6d1ad6 correct a few more issues with unit tests 2025-04-26 02:42:09 -04:00
161776b2c7 recover AtomStyle and SetProperty unit tests 2025-04-26 02:14:10 -04:00
3c5e85a7c0 Merge pull request #4550 from akohlmey/collected-small-fixes
Collected small changes and fixes
2025-04-25 13:46:59 -04:00
73fe2f7915 Update extract(), document, and test 2025-04-22 11:28:17 -04:00
25307b049c Update and rename mol-pair-lj_improved_cut.yaml to mol-pair-lj_pirani.yaml
New name
2025-04-22 14:55:38 +02:00
71da769b11 add force style test 2025-04-18 00:35:01 -04:00
9a08f7b23b add test for indented output 2025-04-17 16:26:03 -04:00
7ca493917a Merge pull request #4542 from akohlmey/add-json-lib
Integrate header-only JSON library
2025-04-17 13:56:16 -04:00
a7760e82e1 Merge pull request #4536 from akohlmey/remove-cmake-tune-flags
Remove CMAKE_TUNE_FLAGS
2025-04-17 11:02:04 -04:00
27d8e103eb move json.hpp class to thirdparty folder and add wrapper for use with LAMMPS 2025-04-16 15:54:59 -04:00
4553108035 add minimal unit test for JSON class 2025-04-15 22:11:44 -04:00
994b7b4937 Merge pull request #4540 from evoyiatzis/fix-adapt-dihedral
extend fix adapt to treat dihedrals
2025-04-13 05:39:58 -04:00
af718e8162 remove one more use to CMAKE_TUNE_FLAGS 2025-04-07 22:50:38 -04:00
99b484a0cc add Kokkos/OpenMP version of mliap unified test 2025-04-07 18:06:31 -04:00
c505bfbdfe make sure OpenMP has a sufficient number of threads allocated 2025-04-07 18:06:07 -04:00
499192a1b2 restore option to request neighbor lists with neighbors of ghosts 2025-04-07 16:27:16 -04:00
fe9915f307 disable support for neighbors of ghosts. see also bff980b56f 2025-04-07 14:37:35 -04:00
2b38b6d1c0 extract() implementation for dihedral class2 2025-04-07 11:35:20 +02:00
e93709d34e extract() implementation for dihedral helix 2025-04-07 11:20:53 +02:00
7655a4cb84 extract() implementation for dihedral multi/harmonic 2025-04-07 09:30:44 +02:00
e956e5ccda extract() implementation for dihedral charmm and charmmfsw 2025-04-07 09:24:44 +02:00
55964c1233 extract() implementation for dihedral cosine squared restricted 2025-04-07 09:11:42 +02:00
27ac8c0ea1 extract() implementation for dihedral opls 2025-04-07 09:05:42 +02:00
6267389801 must force OMP_NUM_THREADS=1 for all tests to pass 2025-04-06 11:30:41 -04:00
da2bc03ae6 do explicit loop over nlocal to avoid out-of-bounds access with implicit loop 2025-04-06 06:21:39 -04:00
e0847f2195 fix memory leak in test 2025-04-05 00:26:20 -04:00
d1dd05bf4e update unit test for quadratic dihedral 2025-04-04 17:19:54 +02:00
ccd6eeb8af unit test 2025-04-04 16:53:57 +02:00
8df9f3404b Merge pull request #4467 from evoyiatzis/patch-2
extend fix adapt to treat improper angles
2025-04-02 12:18:40 -04:00
5933eca83f Merge pull request #4515 from akohlmey/collected-small-fixes
Collected small fixes and updates
2025-04-01 21:16:16 -04:00
b0ca9ed0d4 enable lj/cubic for fix adapt 2025-04-01 16:19:37 +02:00
db8dae3300 enable lj/gromacs for fix adapt 2025-04-01 15:36:44 +02:00
c99ae613de enable lj96 for fix adapt 2025-04-01 11:34:11 +02:00
2ea5cf1206 Merge remote-tracking branch 'github/develop' into collected-small-fixes 2025-03-25 14:16:04 -04:00
9e241df062 Merge pull request #4182 from akohlmey/group-bitmap-accessor
Refactor code to use group bitmap accessor
2025-03-25 14:12:27 -04:00
824b1b0b66 relax epsilon to pass tests on macos-arm64 2025-03-23 16:36:16 -04:00
7d6c19f51b adjust for macos_arm64 arch 2025-03-17 18:12:33 -04:00
2c3824bdd0 update remaining places that used to support -DLAMMPS_SMALLSMALL 2025-03-15 02:11:50 -04:00
81ab0b7504 Merge pull request #4456 from akohlmey/add-error-explanations
Add short explanations and URL to them for common errors and warnings
2025-03-14 20:18:34 -04:00
7374d38b44 Update mol-pair-yukawa.yaml 2025-03-14 09:27:32 +01:00
0f10741f71 update tests for variable commands 2025-03-13 04:38:58 -04:00
b3e75a6f84 adjust BondStyle:class2 epsilon for aarch64 and ppc64le builds 2025-02-24 12:09:51 -07:00
b77c3bf8c7 make compatible with more strict consteval format requirements of C++20 2025-02-21 21:54:28 -05:00
1e078665f6 fix bug in angle style cosine/delta 2025-02-21 16:18:56 -05:00
c83ae0365e fix typo ncite in test_improper_style.cpp 2025-02-14 09:09:10 +02:00
2a35452c13 fix typo and add new line 2025-02-14 06:40:01 +00:00
52312fcd1d test for extract() in improper class 2025-02-14 06:22:29 +00:00
ed9b22cb0e rename k and chi in improper-distance.yaml 2025-02-11 16:03:42 +02:00
fb6a1ad603 rename kw to k in improper-inversion_harmonic.yaml 2025-02-11 15:58:47 +02:00
c66ca60f65 rename kw to k in improper-umbrella.yaml 2025-02-11 15:53:14 +02:00