Commit Graph

165 Commits

Author SHA1 Message Date
8bde9ffd53 silence compiler warning 2023-09-08 11:42:34 -04:00
43d1d8c86b make atom_modify map settings in restart file overridable 2023-08-30 23:51:25 -04:00
a81412f015 remove MPIIO sources and references to them. update Purge.list and build systems 2023-08-20 21:51:33 -04:00
564a8e88c1 use blanks on both sides of comparison operators not only one, remove blanks next to parenthesis 2023-07-11 10:31:16 -04:00
3ce79f8da3 strip style suffixes when writing restart files if suffixes are enabled 2022-11-24 11:51:58 -05:00
4392b9c8cb store LAMMPS version of restart, if initialized from restart file 2022-11-10 02:24:50 -05:00
2132b1d904 update developer reference text 2022-10-24 11:08:26 -04:00
cccf3f6f78 change email for contacting LAMMPS developers, add to homepage checker 2022-10-20 20:36:03 -04:00
67f6adebb7 whitespace fixup with dynamic casts 2022-09-10 13:26:38 -04:00
b4410fa72a Merge branch 'develop' into type-labels 2022-09-09 16:31:38 -04:00
d2587cd45e print an error if the filename before '*' is too long for the regex matcher 2022-09-07 21:06:01 -04:00
363b80f85c begin unfeaturing multiple label maps feature 2022-08-09 01:01:31 -04:00
f9717049b1 Merge branch 'develop' into type-labels 2022-08-08 17:16:50 -04:00
7d49ad5924 enable remap for restarting by default, add noremap option 2022-06-21 19:42:17 -04:00
0bedff1ce0 implement set_time command 2022-05-03 13:15:52 -04:00
198d07e905 print warning when fix property/atom is issues before reading a restart 2022-04-14 11:06:35 -04:00
200b4f13c7 use dynamic cast instead of c-style cast when casting from base type to derived class 2022-04-10 18:18:06 -04:00
39b316729b use auto type when assigning from cast or using new 2022-04-10 18:16:36 -04:00
8d4956046b Merge branch 'develop' of https://github.com/lammps/lammps into lammps-develop 2021-11-04 21:20:29 -04:00
2e362b1f3f use get_(fix|compute)_by_id() instead of find_(fix|compute)() 2021-10-20 06:56:46 -04:00
8b36061db4 replace MPI_Wtime() with platform::walltime() 2021-10-05 22:53:39 -04:00
5128eb7b43 port read/write_restart to use the platform namespace 2021-10-05 16:35:37 -04:00
37bfe3d0ce integrate platform sub-namespace into source code and documentation
this updates function calls to functions that have been moved from
the utils namepsace or the Info class to platform::
2021-10-02 16:55:11 -04:00
67ae6eb7b6 Merge branch 'lammps:master' into type-labels 2021-09-30 09:44:18 -04:00
bca99f684f update list and order of include files from include-what-you-use analysis 2021-09-18 14:16:48 -04:00
385220fd4b format changes 2021-09-17 22:50:15 -04:00
2a06484511 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master2 2021-08-20 10:53:04 -04:00
cba8e8237a avoid memory leak with MPI-IO 2021-08-13 06:25:21 -04:00
211d6636b4 modernize and simplify code to find best matching restart file 2021-07-29 12:09:55 -04:00
b124de3484 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master 2021-06-07 22:48:51 -04:00
09c19a936b update URLs in source code and manual 2021-05-24 14:18:20 -04:00
d8291eea7b Merge branch 'master' into prepare-clang-format
# Conflicts:
#	src/MOLECULE/bond_fene.h
#	src/MOLECULE/bond_fene_expand.h
2021-05-11 21:49:48 -04:00
d1941392d3 disable clang-format for all existing .cpp files (for now) 2021-05-05 23:53:38 -04:00
22e93468d6 simplify code by appling varargs messages and warnings 2021-05-05 18:19:12 -04:00
1e294111e7 Merge branch 'master' of https://github.com/lammps/lammps into lammps-master 2021-04-27 14:46:33 -04:00
6b04ebd617 Merge branch 'master' into varargs-log-error-functions 2021-04-26 13:27:58 -04:00
e9e0bb71b6 Use varargs version of Error:all() and Error::one() where applicable 2021-04-25 21:30:51 -04:00
ef858ae70f silence compiler warnings 2021-04-23 16:19:57 -04:00
d2cdb318ab apply new logmesg() overload to a bunch of cases. 2021-04-21 23:38:45 -04:00
4ed57cb757 Merge pull request #2705 from akohlmey/collected-small-changes
Collected small changes and fixes
2021-04-16 17:07:39 -04:00
6e739c04e4 use safe fread() call 2021-04-14 20:02:05 -04:00
b53822da46 provide Command base class in command.h for deriving command styles from 2021-04-13 17:47:00 -04:00
8e255f619b compiler issues 2021-01-29 19:12:26 -05:00
797555b5ce toward multiple maps 2021-01-28 23:44:02 -05:00
739dc46fab type labels: restart support 2021-01-19 21:52:22 -05:00
9c129d3a34 update output of read_restart to make read_data and signify if atom style template is used 2020-10-24 01:05:11 -04:00
adf74b3a22 use https://lammps.sandia.gov based URLs consistently 2020-10-21 16:45:30 -04:00
4c51a8ae57 move version and num_ver from Universe to LAMMPS and make num_ver an int 2020-09-19 11:37:08 -04:00
0f6a34775c Merge branch 'master' into symbolic-atom-constants 2020-09-15 17:44:31 -04:00
f1ef7d85a8 T2345: Replace instances of NULL with nullptr
The following changes have been applied to src and lib folders:
regex replace: ([^"_])NULL ⇒ \1nullptr (8968 chgs in src, 1153 in lib)
Manually find/change: (void \*) nullptr ⇒ nullptr (1 case)
regex find: ".*?nullptr.*?"
  Manually ~14 cases back to "NULL" in src, ~2 in lib
  regex finds a few false positive where nullptr appears between two
  strings in a function call
2020-09-12 09:34:38 -06:00