Commit Graph

120 Commits

Author SHA1 Message Date
ecd3652f61 update to current master 2020-04-30 11:57:17 -06:00
ac143dbdb7 capitalize comment 2020-01-21 17:57:12 -07:00
11f687c1fb make comment string consistent 2020-01-21 17:56:00 -07:00
646dc83394 remove trailing whitespace 2020-01-21 15:46:28 -05:00
90ff2eb6c9 modified versions of creating atoms on subset of lattice, ditto for set type/fraction 2020-01-21 13:31:47 -07:00
4f6cb13592 added atom styles with bonus data, also a few USER packages 2019-11-27 16:03:50 -07:00
b6b022b610 whitespace cleanup: remove trailing blanks 2019-11-03 11:03:39 -05:00
a50d57bceb Merge branch 'master' into improve-include-consistency
# Conflicts:
#	src/utils.cpp
2019-07-19 17:57:58 -04:00
1de00aaab0 improve parsing of data file header
the header lines are now checked using regular expressions
instead of strstr() which allows for stricter checking, but
also is more forgiving in terms of extra or different whitespace

return value of sscanf() calls is checked and on failure LAMMPS errors out
2019-07-19 11:16:41 -04:00
ce6fa0118a continuing to clean up include file lists 2019-07-04 08:39:17 -04:00
256531a29a put implementation header first for all remaining main folder source files 2019-07-03 19:34:13 -04:00
55116db8fb avoid segfault and print more meaningful error message with empty lines in coeff sections 2019-05-20 14:15:04 -04:00
3f9d59294e replace STL map with atom->map in special, better code comments 2019-03-26 11:01:37 -04:00
9912c44413 rendevous comm option for special bonds and fix rigid/small 2019-03-26 11:01:33 -04:00
d890848412 add a check for consistent bonus data 2019-02-17 15:03:59 -05:00
d2093fe8c2 fixing a version conflict for an if statement 2019-02-11 18:39:07 -07:00
39b6e0b7c8 allowing shrink wrap with comm tiled 2019-02-11 16:55:31 -05:00
b417cfda9b removed dead code and reduce compiler warnings about unused parameters 2019-02-03 11:36:41 -05:00
a942d8b3ba use memset() for clearing of arrays 2018-11-14 05:30:23 -05:00
7a22b8aa62 check only in currently added data file atoms for dihedral overflow 2018-11-14 05:29:26 -05:00
4d52cb9245 more buffer overflow avoiding through using snprintf() 2018-09-06 09:57:43 -04:00
e4071d7f46 replace C-style include files with their C++ equivalents 2018-04-27 18:00:24 -04:00
59dbb49cf9 remove trailing whitespace 2018-03-16 12:37:27 -04:00
ee862d8bf5 replace leading tabs 2018-03-16 12:34:33 -04:00
bba4bd1489 support offsets for molecule IDs (if available) in read_data similar to atomIDs
suggested by felipe perez in https://sourceforge.net/p/lammps/mailman/message/36236631/
2018-02-23 18:02:05 -05:00
aa3f4b7690 change the handling of reading "extra XXX per atom", so that the final choice is the larger of the value in the file and the keyword 2017-06-29 16:09:23 -04:00
38075455b6 new keywords for read_data: extra/X/per/atoms + changes to docs 2017-06-28 17:55:30 -07:00
218e121b41 Merge branch 'master' into bounds-error-with-code-line 2016-10-28 11:11:28 -04:00
d9891abdf4 new library functions 2016-10-27 09:34:04 -06:00
f9a9e27f5a add error location propagation to atom->set_mass() and atom->check_mass() 2016-10-26 16:01:40 -04:00
547dd3edc8 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15259 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-02 21:03:48 +00:00
88812c44fb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15250 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-01 23:31:09 +00:00
94bdf1237b git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@15236 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-07-01 14:21:54 +00:00
08271a0200 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14868 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-04-22 17:54:49 +00:00
8e36364f5c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14805 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-04-07 21:04:44 +00:00
ce471ffcdb git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14518 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-29 16:31:49 +00:00
e24ed78dd1 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14420 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2016-01-11 22:00:15 +00:00
7e9270e813 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14381 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-17 23:05:20 +00:00
e993934732 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14276 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-12-01 14:32:42 +00:00
354e20f431 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14220 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-10-30 20:04:06 +00:00
b229c719d0 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@14163 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-10-22 21:48:05 +00:00
047be536bc git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13983 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-09-02 20:39:55 +00:00
6b854b397c git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13952 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-08-28 23:41:05 +00:00
3841dd58ca git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13931 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-08-21 22:55:12 +00:00
62d15abd2a git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13653 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-21 14:14:33 +00:00
75a9c73492 git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13652 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-18 00:40:18 +00:00
11de055c0f git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13644 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-17 23:33:36 +00:00
1ebb654b4d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13643 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-17 23:20:48 +00:00
f7bc08d83d git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13601 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-07-15 21:29:44 +00:00
8df457d1ef git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@13413 f3b2605a-c512-4ea7-a41b-209d697bcdaa 2015-04-16 15:09:54 +00:00