Commit Graph

4062 Commits

Author SHA1 Message Date
52bec0f380 patch 10Aug17 2017-08-10 16:44:09 -06:00
f9a515efd3 add some remarks about makefile settings on windows 2017-08-10 07:24:24 -04:00
5b55744209 fix a header line formatting issue 2017-08-10 07:21:39 -04:00
f01103dd08 correctly use the term CUDA (instead of Cuda) when not referring to the KOKKOS device flag (which is Cuda) 2017-08-09 19:08:23 -04:00
81f4d7ecb5 rework section 4 (Packages) in the manual to match Install.py scripts 2017-08-09 19:07:20 -04:00
0a54c34e34 Merge pull request #600 from akohlmey/install-and-docs-reviewed
Installation scripts and docs reviewed for release
2017-08-07 08:02:04 -06:00
e0f9a7c34c Adds BOW tutorial link in main menu 2017-08-07 00:06:53 -04:00
aaf17bde3f Added tutorial for using LAMMPS in Bash on Windows 2017-08-07 00:06:12 -04:00
5ad8a3332d Merge pull request #55 from GarrettTow/patch-1
Fixed typo in "compute_voronoi_atom.txt"
2017-08-04 19:18:57 -04:00
ca7a3a6316 Fixed typo in "compute_voronoi_atom.txt"
There was the typo "requiers" in the Restrictions section of compute_voronoi_atom.txt.
2017-08-04 17:48:27 -04:00
59ac6ef573 correct a link and a name for OpenKIM 2017-08-04 11:19:09 -04:00
2fa16bcd4c make overlapping links to references unique to avoid anchor label errors 2017-08-04 11:11:41 -04:00
96d3712817 Add missing link flag 2017-07-31 15:52:44 -06:00
b395ef00b4 Update tutorial_pylammps.txt 2017-07-31 15:50:14 -06:00
e7d9aabca6 Merge branch 'kim-install' into install-and-docs-reviewed 2017-07-28 11:25:08 -04:00
72419b6313 Merge remote-tracking branch 'github/kim-doc' into install-and-docs-reviewed 2017-07-26 19:35:15 -04:00
da7a5f55d3 Merge branch 'kim-install' into install-and-docs-reviewed 2017-07-26 19:32:55 -04:00
934cbbbeca restore lost KIM doc section in Section packages 2017-07-26 16:07:08 -06:00
a59b7e4d56 patch 24Jul17 2017-07-24 09:09:22 -06:00
3449d42267 include pair style kim doc changes that were accidentally included in PR #590 2017-07-20 17:58:49 -04:00
551001f172 revert change, that is part of the kim-install branch and changeset 2017-07-20 17:08:19 -04:00
59db5f6a17 update of Fortran-DFTB interface to be compatible with fix msst 2017-07-20 14:40:35 -06:00
3cd597e948 Merge pull request #585 from akohlmey/make-py-manual-cleanup
Make.py removal and manual cleanup
2017-07-20 12:05:04 -06:00
eca61226c2 Merge pull request #583 from giacomofiorin/colvars-update-2017-07-19
Update Colvars to version 2017-07-15 and support automated builds for it
2017-07-20 12:04:49 -06:00
fac3e3daa2 Merge pull request #581 from libAtoms/idces2quip
Modified USER-QUIP interface to pass lammps atom IDs
2017-07-20 12:04:32 -06:00
a351977c59 update manual links that got broken when removing and renumbering a section 2017-07-20 12:25:42 -04:00
ee6cac826e Update Colvars to version 2017-07-15 and support automated builds for it 2017-07-19 14:24:07 -04:00
52a1c54d50 support QUIP wrapper API version query, relax hybrid restriction to allow hybrid/overlay, update docs 2017-07-19 13:17:35 -04:00
fcf9607a66 Update USER_QUIP docs to clarify use of "special_bonds" 2017-07-19 17:47:21 +01:00
5cbaf7ca1d correct commands table format issue 2017-07-18 14:47:54 -04:00
49e6c2eb7d remove references to Make.py from the manual and instead refer to section 4 2017-07-18 13:14:03 -04:00
a92d792537 update manual links that got broken when removing and renumbering a section 2017-07-18 12:55:55 -04:00
296e572e69 better Install.py script for KIM from Ryan Elliott 2017-07-14 16:25:16 -06:00
3b1134c164 correct formatting error in peridynamics pair style docs 2017-07-14 13:42:02 -04:00
fc36754ca2 Merge pull request #561 from v0i0/fix-airebo-various
Fix Various AIREBO issues
2017-07-13 13:10:42 -06:00
3a46c34c2f Merge pull request #574 from lammps/snap-virial
changes to SNAP virial from Aidan
2017-07-13 13:07:29 -06:00
a3a0c9b144 Merge pull request #570 from akohlmey/collected-small-changes
Collected small changes
2017-07-13 11:26:47 -06:00
e58bcd8b4a Merge pull request #568 from akohlmey/fix_gcmc_parallel_workaround
Workaround for data corruption when using fix gcmc in parallel with shake or fix rigid
2017-07-13 11:23:49 -06:00
ef2f4980e9 Merge pull request #566 from akohlmey/compute_rdf_dynamic
Dynamic group and normalization support for compute rdf
2017-07-13 11:23:22 -06:00
d3a45f6d50 Merge pull request #560 from aershadinia/master
EES wall potential
2017-07-13 11:22:47 -06:00
d0cc1dfbb8 changes to SNAP virial from Aidan 2017-07-13 11:19:35 -06:00
c8939d8df6 clarify explanation of body style molecule in rigid fixes 2017-07-11 09:43:54 -04:00
c9a0d38a3e mention restriction for use with fix shake or fix rigid in fix gcmc docs 2017-07-10 17:34:00 -04:00
fe888e4622 add support for recomputing normalization factors and finite size correction during 2017-07-07 15:39:25 -04:00
4339379948 patch 6Jul17 2017-07-06 13:58:26 -06:00
23925b3a57 update fix wall/ees and wall/region/ees file to conform more to common formatting
also fix some typos and formatting issues
2017-07-06 14:47:44 -04:00
423e3b6389 integrate fix wall/ees and wall/region/ees into doc system 2017-07-06 14:45:51 -04:00
8be6d5bfd8 Merged two doc files 2017-07-06 20:21:55 +09:00
a62eb43791 Delete "fix_wall_region_ees.txt" 2017-07-06 20:20:12 +09:00
33be51af54 Deleted "fix wall/region/ees" doc file 2017-07-06 20:19:40 +09:00