Commit Graph

17232 Commits

Author SHA1 Message Date
267782d689 Merge pull request #1459 from akohlmey/next-patch-release
Step version string for next patch release
patch_15May2019
2019-05-14 21:30:28 -04:00
f2b293d93b Merge pull request #1460 from akohlmey/collected-small-changes
Some more small changes
2019-05-14 17:55:36 -04:00
6e842ba84a fix typo 2019-05-14 17:36:26 -04:00
30dc7f70b5 correct repeated words in docs 2019-05-14 17:13:46 -04:00
98702cc0b9 Merge pull request #1461 from lammps/doc-tweak-hyper
add missing formatting info
2019-05-14 17:10:23 -04:00
67532684f9 add missing formatting info 2019-05-14 14:02:54 -06:00
2c51511325 update logfiles for SPIN package with cubic anisotropy 2019-05-14 15:49:41 -04:00
1d5ada136a should set one_coeff flag to 1 in potentials requiring 'pair_coeff * *' 2019-05-14 15:24:37 -04:00
4a4dcef7b7 whitespace cleanup in pair style e3b 2019-05-14 15:24:37 -04:00
4dc90b367e Merge pull request #1458 from wmbrownIntel/user-intel-bigbig
USER-INTEL: Changes to support LAMMPS_BIGBIG in USER-INTEL + fixed check for per-atom virials + fixed check for exclusion with offload.
2019-05-14 15:09:06 -04:00
091dbfa265 Merge pull request #1457 from julient31/fix_cubic_aniso
Adding a cubic anisotropy in the SPIN package, documentation corrections
2019-05-14 15:08:21 -04:00
a26dc1b356 allow using -DLAMMPS_BIGBIG also with CMake 2019-05-14 14:35:41 -04:00
d8fb17e2cb Step version string for next patch release 2019-05-14 10:01:43 -04:00
322c244bec Merge pull request #1456 from akohlmey/fix-mapping-for-KC-etc
Fix element mapping and a few other issues for interlayer potentials
2019-05-13 21:12:58 -04:00
60f6c3f3dc Merge pull request #1428 from sstrong99/e3b
add E3B water model to USER-MISC package
2019-05-13 21:12:26 -04:00
c911a44298 Merge pull request #1450 from akohlmey/cmake-latte-pass-cmake-settings
Pass more cmake settings to LATTE downloaded library build
2019-05-13 21:11:24 -04:00
52e3aeab33 revert incorrect changes in commands_list.txt 2019-05-13 21:05:26 -04:00
3a8b3a119f Merge pull request #1451 from rbberger/atom_vec_bond_kokkos_fix
Add missing molecule_flag=1 in atom_vec_bond_kokkos
2019-05-13 20:59:51 -04:00
8e18f2bf7e Commit2 JT 051319
- corrected doc issues
2019-05-13 17:32:44 -06:00
11f223416c Commit JT 051319
- added a cubic anisotropy in fix_precession_spin
- added associated doc and examples
- corrected neb/spin commands in doc/src/
- added tools/spin/ description
2019-05-13 16:59:39 -06:00
d3d4b420ba USER-INTEL: Changes to support LAMMPS_BIGBIG in USER-INTEL + fixed check for per-atom virials + fixed check for exclusion with offload. 2019-05-13 05:02:46 -07:00
805cc18b2d Merge branch 'master' into e3b 2019-05-12 22:22:31 -05:00
e228555aed more consistency changes for interlayer potentials 2019-05-11 17:05:27 -04:00
8eeb92b82b restore original coeff() code with one modification. now setflag is only set for pairs of types that both are mapped to elements (and thus not NULL) 2019-05-11 17:04:57 -04:00
c581e9349a update interlayer potential examples for now requiring CH.rebo potential file with rebo pair style 2019-05-11 16:46:21 -04:00
b2942cbafa correctly handle coeff statement for ilp/graphene/hbn 2019-05-10 21:07:54 -04:00
c86359966c error out when offset flag is unset via "pair_modify shift no" 2019-05-10 21:07:05 -04:00
a7c9560dc1 Merge pull request #1453 from mjwen/pair_drip
add pair style drip
2019-05-10 20:44:28 -04:00
03505a6c48 Merge pull request #1455 from lammps/doc-tweak
mis-labeling of some rigid fixes
2019-05-10 20:42:39 -04:00
238382e0ca fix handline of setflag and coeffs to correctly work with system, that have extra atom types. 2019-05-10 10:26:33 -04:00
2bc089db27 mis-labeling of some rigid fixes 2019-05-10 07:42:11 -06:00
799f4061f4 Merge pull request #3 from akohlmey/pair_drip
Update to master with refactored REBO pair style and adjusted examples
2019-05-09 12:18:11 -05:00
2f580380a4 adjust drip potential example for new requirements for pair style rebo. recreate log files 2019-05-09 12:29:38 -04:00
47cf17e5c8 Merge branch 'master' into pair_drip 2019-05-09 12:19:41 -04:00
928600a878 Merge pull request #1452 from akohlmey/github-rebo-bugfix
Resubmission of REBO bugfix for easier review
2019-05-09 12:18:05 -04:00
7b2d526f86 Merge pull request #1448 from akohlmey/collected-small-changes
Collected small changes and bugfixes
2019-05-09 12:17:19 -04:00
0034473e66 update legacy pdf manual input config 2019-05-08 10:19:21 -04:00
da75fc3eaa incorporate compute_pe_e3b into compute_pair 2019-05-08 09:05:09 -05:00
711cd4122f corrections to documentation and implementation of pair styles lj/mdf, buck/mdf, and lennard/mdf 2019-05-07 19:52:00 -04:00
45e6ed018e correct formula for lennard/mdf potential 2019-05-07 19:45:13 -04:00
8c193b8c42 add support for write_data/write_coeff to pair style lj/mdf 2019-05-07 19:28:19 -04:00
12f8834b80 correction of the incomplete implementation warning in write_coeff 2019-05-07 19:26:57 -04:00
6c3cae8823 remove unused vars 2019-05-07 15:37:45 -05:00
1d1611ce44 init del3 to silence valgrind errors 2019-05-07 15:35:37 -05:00
a87d8e124f Merge pull request #1449 from akohlmey/fix-print-w-variable-step
Support using a variable instead of a constant interval for fix print
2019-05-06 12:10:42 -04:00
cc30688137 Merge pull request #1364 from stanmoore1/kk_binsize
Change defaults for KOKKOS package
2019-05-06 12:10:08 -04:00
b3f4e2055e Merge pull request #1438 from giacomofiorin/colvars-update
Update Colvars library to version 2019-04-26
2019-05-06 12:08:50 -04:00
8212dca609 Merge pull request #1447 from ohenrich/user-cgdna
Homogenised label of relative hbond and stk strength to conform with oxDNA literature
2019-05-06 12:07:41 -04:00
319ed5dd48 Merge pull request #2 from akohlmey/pair_drip
Silence warnings about unused variables and parameters, minor tweaks
2019-05-05 09:29:00 -05:00
bac8b267df make sure fix deform related variables are always initialized to avoid issues with the DomainOMP class. 2019-05-05 10:26:27 -04:00