Commit Graph

4427 Commits

Author SHA1 Message Date
fa73fab5df patch 16Jul18 2018-07-16 18:12:15 -06:00
c589029219 Merge pull request #1002 from rbberger/set_velocity_command
Allow 'set' command to change atom velocities
2018-07-16 08:50:15 -06:00
1c007ce7a1 Merge pull request #1000 from HaoZeke/fixDocs
docs: Fix sneaky unicode character
2018-07-16 08:49:13 -06:00
5fc4aaef06 Merge pull request #940 from Pakketeretet2/port-enforce2d-kokkos
Port enforce2d kokkos
2018-07-16 08:48:21 -06:00
aa3d3213c9 Update set command documentation 2018-07-13 23:06:42 -04:00
d4f8940ff2 Update command doc page for Kokkos enforce2d 2018-07-13 07:40:06 -06:00
85511a4db8 docs: Fix sneaky unicode character
Fixes the `pdf` target of the `Makefile`.
2018-07-13 00:44:04 +05:30
b31f0245d0 2 small bug fixes to load balancing 2018-07-11 15:55:16 -06:00
5d13321425 Standardize suffix paragraph in fix_enforce2d.txt 2018-07-11 12:15:50 -06:00
acdc240cdd better rRESPA doc page, also a new Makefile.theta 2018-07-11 08:42:28 -06:00
ade9b7bfc3 Commit2 JT 070918
- modified the citeme reference (replaced by the JCP one)
- same modification in doc and src/SPIN
2018-07-10 09:44:14 -04:00
9d5dc561ca Commit1 JT 070918
- created README in examples/SPIN
- modified doc/src/set.txt to define 'spin' and 'spin/random' keywords
2018-07-10 09:44:14 -04:00
199c96f985 update and clarify the choice of atom ids for angle style dipole (which is not really an angle potential) 2018-07-10 09:22:41 -04:00
a52ddf8759 patch 29Jun18 2018-06-30 08:03:24 -06:00
ea35235ca0 couple more doc tweaks - sigh 2018-06-29 16:12:25 -06:00
d2dd76e655 added SPIN package to Section_packages doc 2018-06-29 14:56:27 -06:00
6900f9edf9 Merge branch 'master' into collected-small-changes 2018-06-29 14:59:02 -04:00
ec99b0957c new ARM makefiles, also some doc tweaks 2018-06-29 08:06:51 -06:00
6bd5a3d69b Merge pull request #935 from julient31/spin_origin
Spin origin
2018-06-27 16:58:27 -06:00
264f832b18 fix formatting of dump_modify docs 2018-06-27 07:58:57 -04:00
8e14143908 Merge pull request #925 from PabloPiaggi/pair_entropy
Pair entropy fingerprint
2018-06-26 13:16:09 -06:00
e2622f0230 Remap the paragraph 2018-06-26 17:27:55 +03:00
e4dd6dec40 Refine the documentation 2018-06-26 16:36:16 +03:00
c9d147c366 New paramteters for potential #839 2018-06-26 11:09:48 +03:00
86519ce213 Rename compute to entropy/atom 2018-06-24 00:25:07 +02:00
d237625d2a patch 22Jun18 2018-06-22 14:08:09 -06:00
510834cb7b Merge pull request #960 from lammps/latte-tweak
made latte.in compatible with v1.1.1 and updated log files
2018-06-22 10:18:19 -06:00
f5f73b0172 Merge pull request #958 from ndtrung81/gpu-updates
Bug fixes and updates to the GPU package
2018-06-22 08:52:20 -06:00
cbfb751e92 made latte.in compatible with v1.1.1 and updated log files 2018-06-21 11:10:29 -06:00
a9b794b2ab Updates to the core-shell gpu pair styles 2018-06-20 10:43:13 -05:00
d4861e71d2 integrate SPIN package into documentation, fix links and make it consistent 2018-06-18 18:36:30 -04:00
605b4dca22 fix overlooked merge conflict 2018-06-18 18:09:59 -04:00
dade67664d restore bugfix for refrences 2018-06-18 18:07:26 -04:00
93d6510d34 restore deleted file 2018-06-18 18:02:40 -04:00
4f8d1893e9 restore fix for formatting cleanup 2018-06-18 18:01:28 -04:00
7c7a80b31a restore deleted file 2018-06-18 17:59:22 -04:00
03a7d1cd5d Merge pull request #933 from rtoijala/fix_dt_reset_energy
Limit atom energy change in fix dt/reset
2018-06-18 13:43:03 -06:00
08331da93d Merge pull request #950 from martok/subst-equal-fmt
Add support for inline format strings to immediate variable substitution
2018-06-18 13:42:24 -06:00
ab0f3debeb Merge pull request #948 from martok/variable-string
Variable style 'string' substitutes variables in definition
2018-06-18 10:50:36 -06:00
c4bcb7e73d mention requirement to come after the box creation in Restrictions section 2018-06-15 17:52:54 -04:00
18b543179c fix typo 2018-06-15 17:47:23 -04:00
14c4438a72 update docs to reflect the state of reserving space for topology info with molecule files 2018-06-15 17:46:09 -04:00
5fcdfe6dcb describe the use of wildcards for adapting ranges of bond types 2018-06-15 17:35:43 -04:00
8a2faff541 integrate compute pentropy/atom into the documentation tree 2018-06-15 16:40:25 -04:00
c5b51df06e Add support for inline format strings to immediate variable substitution 2018-06-14 14:17:37 +02:00
3e79296dcf Variable style 'string' substitutes variables in definition 2018-06-14 13:10:08 +02:00
962946ee45 Ported fix enforce2d to Kokkos. 2018-06-01 14:52:34 -04:00
56c3a0be29 support virtualenv on machines with python3 where it is called virtualenv-3 2018-05-31 19:03:28 -04:00
cf3095e938 document restartinfo bug message, add check to Pair::write_restart as well 2018-05-31 19:02:03 -04:00
38182dcc60 clarify docs on what energy is monitored
changes to the energy only consider the kinetic energy, so make that explicit in the augmented `fix dt/reset` docs
2018-05-31 17:32:19 -04:00