d2fc88a626
patch 17Jan17
2017-01-17 10:14:53 -07:00
c19d2011bb
Merge pull request #334 from sstrong99/flow_gauss_changeRef
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Updated the reference for the flow/gauss method
2017-01-17 09:12:22 -07:00
973bef4d45
Merge pull request #332 from akohlmey/coord-atom-orientorder-atom-enhancements
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Coord atom orientorder atom enhancements
2017-01-17 09:11:45 -07:00
252e07e083
Merge pull request #330 from akohlmey/collected-small-bugfixes
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Collected small bugfixes
2017-01-17 09:08:00 -07:00
d8bc590aaf
Merge pull request #327 from stanmoore1/kokkos_lib_update
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Updating Kokkos lib
2017-01-17 09:04:12 -07:00
c9bea60710
Merge pull request #326 from Pakketeretet2/github-tutorial-update
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Updated images of succesful merge.
2017-01-17 09:03:46 -07:00
5cd856c97f
fix spring doc page update
2017-01-17 09:02:56 -07:00
98ceb6feb1
add missing html files to lammps.book
2017-01-13 18:11:23 -05:00
1229f6f60b
Updated the reference for the flow/gauss method, the new reference is much more comprehensive
2017-01-12 10:15:18 -07:00
6950a99162
Revert "remove obsolete warning about fix rigid image flag restrictions"
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This reverts commit 51e52b477a
2017-01-11 19:49:58 -05:00
1d0e600ab7
formatting improvements and small corrections for timer settings and output discussions
2017-01-10 23:47:14 -05:00
95706ac846
import contributed code for computes coord/atom and orientorder/atom
2017-01-10 12:29:22 -05:00
0db2a07993
another workaround for duplicate labels (which sphinx does not like)
2017-01-09 17:51:19 -05:00
33412c76ed
correct some formatting issues with USER-NC-DUMP
2017-01-09 17:50:49 -05:00
e5ac49d1de
Merge branch 'master' into collected-small-bugfixes
2017-01-09 17:13:46 -05:00
c31f1e9f22
add fix mscg command, example, lib
2017-01-09 13:36:40 -07:00
ebd25cc078
Updating docs for Kokkos package
2017-01-09 12:40:33 -07:00
20f8a8c219
Merge branch 'master' into github-tutorial-update
2017-01-09 14:38:09 +01:00
51e52b477a
remove obsolete warning about fix rigid image flag restrictions
2017-01-06 21:30:33 -05:00
20a4e365b7
reduce warning when processing manual with sphinx
2017-01-06 21:30:13 -05:00
51fa33a407
patch 6Jan17
2017-01-06 11:14:48 -07:00
ccd09e3967
Updated images of succesful merge.
2017-01-06 19:04:26 +01:00
142770cb2a
enable pppm/tip4p to work with triclinic
2017-01-06 10:38:32 -07:00
3ac58452de
Merge pull request #310 from EfremBraun/master
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Fix nvk implemented
2017-01-06 10:02:22 -07:00
9b348d567b
Merge pull request #315 from Pakketeretet2/github-tutorial-update
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GitHub tutorial update
2017-01-06 10:01:57 -07:00
41a6a3076e
Merge pull request #309 from giacomofiorin/colvars-2016-12-22
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Update Colvars library to version 2016-12-22
2017-01-06 09:58:20 -07:00
6af56e686d
polish the introduction, some more clarifications, corrections and formatting improvements
2017-01-06 08:31:02 -05:00
eb1c6a225c
typo fixed
2017-01-06 11:54:30 +01:00
4d0a6d83bd
Merged Axel's suggestions and updated text
2017-01-06 11:51:42 +01:00
958722573f
Merge branch 'github-tutorial-update' of https://github.com/Pakketeretet2/lammps into github-tutorial-update
2017-01-06 11:44:16 +01:00
9d46670972
Updated text and images on reverse pull requests
2017-01-06 11:44:14 +01:00
1a9f2df3d0
Updated text and images on reverse pull requests
2017-01-06 11:44:00 +01:00
fe14158c10
some formatting updates and text rewrites in the "do not use git add -a" section
2017-01-04 13:13:56 -05:00
0bcbcca140
Highlighted the assignee, maintainer changes, and mentioned LAMMPS collaborator
2017-01-04 17:28:22 +01:00
933b288ce9
Added explaination for assignee, changes pushed by others and collaborator.
2017-01-04 14:31:23 +01:00
4f45d39ac7
Add warning formatting
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Any paragraph starting with IMPORTANT NOTE: is transformed into a warning.
2017-01-03 02:34:11 +01:00
7d057d4c83
make it more explicit, that master needs to be updated and feature branches should be created from master
2017-01-02 13:02:48 -05:00
4f096dbad5
Updated some inconsistent text.
2017-01-02 18:53:28 +01:00
18b12efc9f
Small changes to tutorial text.
2017-01-02 18:25:36 +01:00
2c7fea1e0d
Second update round to text and images, a third will follow after succesful merge.
2017-01-02 18:15:08 +01:00
4d98bbdfa5
Almost done with the tutorial now
2017-01-02 18:08:14 +01:00
391ab761a4
Finally updated the github tutorial.
2017-01-02 17:55:02 +01:00
aa146e9b38
Moved fix_nvk to USER-MISC, updated documentation to reflect move
2016-12-28 19:06:35 +01:00
68814d4fc8
Made documentation changes to fix nvk
2016-12-28 16:26:05 +01:00
616ca1de03
Fix nvk implemented.
2016-12-28 16:17:07 +01:00
925f42727f
Fix typo
2016-12-27 14:26:43 -05:00
f553e230db
Update Colvars library to version 2016-12-22
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Significant code cleanup and several fixes (walls + extended Lagrangian)
New harmonicWalls bias to apply confining boundaries with time-dependent force
constant & integration
2016-12-27 13:17:34 -05:00
781daad2a0
USER-DPD: update documentation for changes in commit 3faa57
2016-12-22 17:31:17 -05:00
62dea1bb63
21Dec16 patch
2016-12-21 09:53:32 -07:00
81a2db8a0c
17Dec16 patch
2016-12-16 11:36:54 -07:00
