Commit Graph

3580 Commits

Author SHA1 Message Date
b3217218d6 doc page sync with SVN 2016-09-21 20:54:20 -06:00
9ef748bbaa remvoing doc/html 2016-09-20 16:46:59 -06:00
5c37fccf49 fix ti/spring for eam/allow and eam/fs 2016-09-20 12:10:58 -06:00
b9b044e180 new fix ti/spring command, remove fix ti/rs 2016-09-20 10:44:12 -06:00
aa9fe38c5c consolidate ignoring python bytecompiled cache files 2016-09-17 09:50:49 -04:00
abf05eed61 comm tiled bug fix 2016-09-16 10:31:52 -06:00
2f298951cf resolved conflicts 2016-09-14 10:22:46 -06:00
717e719b83 HTML update 2016-09-14 09:35:03 -06:00
10b4411d5b Merge branch 'integration' of github.com:akohlmey/lammps into integration 2016-09-13 17:22:14 -06:00
c744b23c4c doc updates 2016-09-13 17:15:15 -06:00
a69e059be3 Merge pull request #27 from akohlmey/small-bugfixes
Collected small changes and bugfixes
2016-09-13 17:11:23 -06:00
dbc548dd88 Merge pull request #26 from rbberger/is_available_feature
Extend is_available() function to query optional features
2016-09-13 17:10:10 -06:00
25e518a4f4 added options to compute bond/local 2016-09-13 17:03:37 -06:00
ed52f9ea5e pair vashishta/table 2016-09-13 14:54:12 -06:00
944289b018 final version of pair vashishta/table 2016-09-13 14:45:53 -06:00
51e4a568c9 Merge branch 'small-bugfixes' of github.com:akohlmey/lammps into small-bugfixes 2016-09-13 14:32:27 -04:00
a8081d4507 fix qeq Kokkos bug fix by Stan 2016-09-13 10:54:04 -06:00
e53862ca4a update html file updated boundary.txt file 2016-09-11 14:55:13 -04:00
a64eb330e3 document how using shrink-wrap boundaries can cause lost atoms in parallel 2016-09-11 14:48:37 -04:00
d70e051ecd update docs for lj/sf/dipole/sf 2016-09-09 10:00:15 -04:00
e27869daf6 Add updated HTML documentation about new is_available feature category 2016-09-09 05:56:24 -04:00
dc0c0ab214 Add documentation about new is_available feature category 2016-09-09 05:55:28 -04:00
956af8cebb update html file 2016-09-08 17:41:46 -04:00
71eed1d612 update documentation for vashishta pair style 2016-09-08 17:20:52 -04:00
fe581e8ced Merge remote-tracking branch 'lammps-rw/integration' into vashishta-tabulation 2016-09-08 16:21:05 -04:00
b866e0663b Merge pull request #24 from rbberger/info_command_styles
Info command extensions
2016-09-08 14:16:41 -06:00
5d0da95a0b Merge pull request #23 from akohlmey/doc-corrections-and-updates
Doc corrections and updates
2016-09-08 14:15:56 -06:00
1f901c9b2d Update generated HTML docs of info command 2016-09-08 09:53:57 -04:00
79b8f6320d Update docs of info command 2016-09-08 09:53:14 -04:00
43b05a60c7 created vashishta/table variant 2016-09-07 11:56:38 -06:00
0fe7d1d361 correct internal links for Modify LAMMPS section 2016-09-07 10:13:34 -04:00
346ff42498 correct reference in modify section 2016-09-07 10:10:12 -04:00
5feedbd829 regenerate html pages with new txt2rst tool 2016-09-07 10:09:53 -04:00
44ce6fac4b replace backquote with regular quote and `` + '' with double quote. 2016-09-07 08:29:16 -04:00
70d6718aa3 Update discussion on parallel python packages. There seem to be only two left. 2016-09-07 07:42:06 -04:00
348b677148 Make formatting and links more consistent and unique 2016-09-07 07:41:17 -04:00
4c783ea3b7 Enforce l,ule or l,ole command order for RST
(cherry picked from commit 79e867c213)
2016-09-07 02:16:55 -04:00
9e8256aeb0 Refactored code and escape RST special character '_'
(cherry picked from commit 4629a464f7)
2016-09-07 02:16:55 -04:00
925f1bfb6f Escape RST special character '^' and take care of special math cases
(cherry picked from commit 453521c8e6)
2016-09-07 02:16:55 -04:00
3f312244a0 Escape RST special character '*' in final output
(cherry picked from commit 7cb39811d4)
2016-09-07 02:16:54 -04:00
55022d1263 replace :l,ule and :l,ole with :l :ule or :l :ole 2016-09-07 02:11:59 -04:00
0d491d483c avoid Inline substitution_reference start-string without end-string 2016-09-07 02:10:49 -04:00
a31c507370 correct error message text, sync with source 2016-09-06 22:15:49 -04:00
16607a0132 update colvars library to version 2016-08-19
(cherry picked from commit c67326be6d)
2016-09-06 21:27:46 -04:00
ec2a6b9f0d update colvars to version 2016-08-10
(cherry picked from commit f2ddf828e4)
2016-09-06 21:27:41 -04:00
fc2d878305 update manual introduction to represent current status. correct some markup to better pass through sphinx 2016-09-06 21:20:47 -04:00
1c17b98500 Merge branch 'integration' into doc-corrections-and-updates 2016-09-06 20:19:02 -04:00
ace5dc3c7c Merge remote-tracking branch 'lammps-rw/clean-up-docs-for-sphinx' into clean-up-docs-for-sphinx 2016-09-06 19:54:35 -04:00
0252347d43 sync with 7Sep16 patch 2016-09-06 17:00:32 -06:00
c9455c90de Merge pull request #20 from akohlmey/lammps-contribute
Update description of submitting contributions to LAMMPS
2016-09-06 16:55:16 -06:00